ChromoView - clone / Assembly sequencing status
Human: Sub region GRC__HUMAN__ALT_REF_LOCI_50__19 (TPF updated: 2018-01-16) TPF
#
Clone ext/Contig
Clone int
Acc/Fin
1
CH17-87E23
HSCHR19KIR_cA04_CTG3_1
bMO87E23
AC245128.3
finished
2
HSCHR19KIR_cA04_CTG3_1
KU645198
KU645198.1
finished
AGP
AGP_S
AGP_E
Rank
Status
Acc.ver
Clone_S
Clone_E
Str
1
18586
1
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2
AC245128.3
1
18586
+
18587
100553
2
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2
KU645198.1
2
81968
+
Details
#
Clone ext/Contig
Clone int
Status/Date
Acc/Fin
Length
Library
OL Pos
OL Qual
OL details
Cert
1
CH17-87E23
HSCHR19KIR_cA04_CTG3_1
bMO87E23
-
-
AC245128.3
finished
213609
CHORI-17
3' / 5'
18586 / 2
- / -
195024
0
Identified
2016-06-14
agp2oracle
humpub
2
HSCHR19KIR_cA04_CTG3_1
KU645198
-
-
KU645198.1
finished
81968
-
Statistics
Clone Summary
- Number of gaps
- 0
- Total clones
- 2
- Clone HTGS Phases
- finished
- 2
- Number of clones w/o accession
- 0
Overlap Summary
- Total overlap length of fin clones
- 195,024
- Total finished length of fin clones w/ overlap
- 295,577
- Total finished length of fin clones w/o overlap
- 100,553
- Total overlap length of fin+unfin clones
- 195,024
- Total finished length of fin+unfin clones w/ overlap
- 295,577
- Total finished length of fin+unfin clones w/o overlap
- 100,553
TPF
# | Clone ext/Contig | Clone int | Acc/Fin |
---|---|---|---|
1 | CH17-87E23 HSCHR19KIR_cA04_CTG3_1 |
bMO87E23 |
AC245128.3 finished |
2 | HSCHR19KIR_cA04_CTG3_1 |
KU645198 |
KU645198.1 finished |
AGP
AGP_S | AGP_E | Rank | Status | Acc.ver | Clone_S | Clone_E | Str |
---|---|---|---|---|---|---|---|
1 | 18586 | 1 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 | AC245128.3 | 1 | 18586 | + |
18587 | 100553 | 2 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 | KU645198.1 | 2 | 81968 | + |
Details
# | Clone ext/Contig | Clone int | Status/Date | Acc/Fin | Length | Library | OL Pos | OL Qual | OL details | Cert |
---|---|---|---|---|---|---|---|---|---|---|
1 | CH17-87E23 HSCHR19KIR_cA04_CTG3_1 |
bMO87E23 |
- - |
AC245128.3 finished |
213609 | CHORI-17 | 3' / 5' 18586 / 2 - / - |
195024 0 Identified |
2016-06-14 agp2oracle humpub |
|
2 | HSCHR19KIR_cA04_CTG3_1 |
KU645198 |
- - |
KU645198.1 finished |
81968 | - |
Statistics
Clone Summary
- Number of gaps
- 0
- Total clones
- 2
- Clone HTGS Phases
- finished
- 2
- Number of clones w/o accession
- 0
Overlap Summary
- Total overlap length of fin clones
- 195,024
- Total finished length of fin clones w/ overlap
- 295,577
- Total finished length of fin clones w/o overlap
- 100,553
- Total overlap length of fin+unfin clones
- 195,024
- Total finished length of fin+unfin clones w/ overlap
- 295,577
- Total finished length of fin+unfin clones w/o overlap
- 100,553
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