ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_49__19 (TPF updated: 2018-01-16)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 CH17-87E23
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINER
bMO87E23
AC245128.3
finished
2
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINED
KU645197
KU645197.1
finished
1 CH17-87E23
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINER
bMO87E23
AC245128.3
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 36680 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC245128.3 1 36680 +
36681 200283 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 KU645197.1 1 163603 +
200284 241058 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC245128.3 172835 213609 +

Details

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# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH17-87E23
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINER
bMO87E23
-
-
AC245128.3
finished
213609 CHORI-17 3' / 5'
36680 / 1
- / -
163604
0
Identified
2016-06-15
agp2oracle
humpub
 
2
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINED
KU645197
-
-
KU645197.1
finished
163604 - 3' / 5'
163603 / 172835
- / -
163604
0
Identified
2016-06-15
agp2oracle
humpub
 
1 CH17-87E23
HSCHR19KIR_cA01-tB01_CTG3_1
CONTAINER
bMO87E23
-
-
AC245128.3
finished
213609 CHORI-17        

Statistics

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Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
204,378
Total finished length of fin clones w/ overlap
377,213
Total finished length of fin clones w/o overlap
172,835
Total overlap length of fin+unfin clones
204,378
Total finished length of fin+unfin clones w/ overlap
377,213
Total finished length of fin+unfin clones w/o overlap
172,835

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