ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_5__4 (TPF updated: 2016-03-18)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1
HSCHR4_11_CTG12
AF146191
AF146191.1
finished
2 RP11-242C23
HSCHR4_11_CTG12
bA242C23
EPN details
CT476828.7
finished
3
HSCHR4_11_CTG12
HM190170
HM190170.1
finished
4
HSCHR4_11_CTG12
U74497
U74497.1
finished

AGP

Details

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# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1
HSCHR4_11_CTG12
AF146191
-
-
AF146191.1
finished
133974 - 3' / 5'
87617 / 1
- / -
46357
0
Identified
2016-03-15
agp2oracle
humpub
 
2 RP11-242C23
HSCHR4_11_CTG12
bA242C23
-
-
CT476828.7
finished
129120 RPCI-11.1 3' / 5'
112808 / 1
- / -
16312
0
Identified
2016-03-18
agp2oracle
humpub
 
3
HSCHR4_11_CTG12
HM190170
-
-
HM190170.1
finished
3503 - 3' / 5'
3503 / 2186
- / -
2185
0
Identified
2016-03-18
agp2oracle
humpub
 
4
HSCHR4_11_CTG12
U74497
-
-
U74497.1
finished
3664 -        

Statistics

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Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
64,854
Total finished length of fin clones w/ overlap
270,261
Total finished length of fin clones w/o overlap
205,407
Total overlap length of fin+unfin clones
64,854
Total finished length of fin+unfin clones w/ overlap
270,261
Total finished length of fin+unfin clones w/o overlap
205,407

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