ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_7__22 (TPF updated: 2017-09-19)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 ABC11-49492200E12
HSCHR22_7_CTG1
f11A49492200E12
AC225828.3
finished
2 ABC11-47399300K22
HSCHR22_7_CTG1
f11A47399300K22
AC254847.2
finished
3 ABC11-48003200K17
HSCHR22_7_CTG1
f11A48003200K17
AC256292.1
finished
4 RP4-669P10
HSCHR22_7_CTG1
dJ669P10
EPN details
BX247885.11
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 41359 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC225828.3 1 41359 +
41360 65134 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC254847.2 15164 38938 +
65135 86891 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC256292.1 15552 37308 +
86892 174749 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 BX247885.11 45389 133246 +

Details

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# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 ABC11-49492200E12
HSCHR22_7_CTG1
f11A49492200E12
-
-
AC225828.3
finished
41359 ABC11 3' / 5'
41359 / 15164
- / -
15162
0.01
Identified
2016-02-24
agp2oracle
humpub
 
2 ABC11-47399300K22
HSCHR22_7_CTG1
f11A47399300K22
-
-
AC254847.2
finished
38938 ABC11 3' / 5'
38938 / 15552
- / -
15551
0
Identified
2016-02-24
agp2oracle
humpub
 
3 ABC11-48003200K17
HSCHR22_7_CTG1
f11A48003200K17
-
-
AC256292.1
finished
37308 ABC11 3' / 5'
37308 / 45389
- / 8060
37279
0.4
Identified
2016-02-24
agp2oracle
humpub
 
4 RP4-669P10
HSCHR22_7_CTG1
dJ669P10
-
-
BX247885.11
finished
133246 RPCI-4        

Statistics

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Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
67,992
Total finished length of fin clones w/ overlap
250,851
Total finished length of fin clones w/o overlap
182,859
Total overlap length of fin+unfin clones
67,992
Total finished length of fin+unfin clones w/ overlap
250,851
Total finished length of fin+unfin clones w/o overlap
182,859

Dovetails

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# rank accession status length date
1 4 BX247885 unfinished 8,060 Mon, 18 Sep 2017 23:44

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