ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_6__22 (TPF updated: 2014-09-10)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 ABC11-47312000D13
HSCHR22_6_CTG1
f11A47312000D13
AC235563.2
finished
2 ABC11-49599500A20
HSCHR22_6_CTG1
f11A49599500A20
AC254788.1
finished
3 ABC11-47241000C4
HSCHR22_6_CTG1
f11A47241000C4
AC254638.1
finished
4 RP4-669P10
HSCHR22_6_CTG1
dJ669P10
EPN details
BX247885.11
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 38878 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC235563.2 1 38878 +
38879 70727 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC254788.1 9575 41423 +
70728 81319 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC254638.1 29164 39755 +
81320 155930 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 BX247885.11 58636 133246 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 ABC11-47312000D13
HSCHR22_6_CTG1
f11A47312000D13
-
-
AC235563.2
finished
38878 ABC11 3' / 5'
38878 / 9575
- / -
9574
0
Identified
2014-10-02
agp2oracle
humpub
 
2 ABC11-49599500A20
HSCHR22_6_CTG1
f11A49599500A20
-
-
AC254788.1
finished
41423 ABC11 3' / 5'
41423 / 29164
- / -
29163
0
Identified
2014-10-02
agp2oracle
humpub
 
3 ABC11-47241000C4
HSCHR22_6_CTG1
f11A47241000C4
-
-
AC254638.1
finished
39755 ABC11 3' / 5'
39755 / 58636
- / 19769
38809
0.85
Identified
2014-10-02
agp2oracle
humpub
 
4 RP4-669P10
HSCHR22_6_CTG1
dJ669P10
EPN details
Submitted to EMBL
12-JAN-09
BX247885.11
finished
133246 RPCI-4        

Statistics

Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
77,546
Total finished length of fin clones w/ overlap
253,302
Total finished length of fin clones w/o overlap
175,756
Total overlap length of fin+unfin clones
77,546
Total finished length of fin+unfin clones w/ overlap
253,302
Total finished length of fin+unfin clones w/o overlap
175,756

Dovetails

# rank accession status length date
1 4 BX247885.11 unfinished 19,769 Wed, 01 Oct 2014 23:37

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