ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_5__22 (TPF updated: 2014-10-24)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 ABC9-43905700J11
HSCHR22_5_CTG1
f9A43905700J11
AC208162.3
finished
2 ABC9-43817800N19
HSCHR22_5_CTG1
f9A43817800N19
AC254995.1
finished
3 ABC9-43955400E10
HSCHR22_5_CTG1
f9A43955400E10
AC254561.1
finished
4 RP4-669P10
HSCHR22_5_CTG1
dJ669P10
EPN details
BX247885.11
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 38537 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC208162.3 1 38537 +
38538 62689 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC254995.1 12971 37122 +
62690 76240 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AC254561.1 29337 42887 +
76241 153027 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 BX247885.11 56460 133246 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 ABC9-43905700J11
HSCHR22_5_CTG1
f9A43905700J11
-
-
AC208162.3
finished
38537 ABC9 3' / 5'
38537 / 12971
- / -
12970
0
Identified
2014-10-24
agp2oracle
humpub
 
2 ABC9-43817800N19
HSCHR22_5_CTG1
f9A43817800N19
-
-
AC254995.1
finished
37122 ABC9 3' / 5'
37122 / 29337
- / -
29336
0.01
Identified
2014-10-24
agp2oracle
humpub
 
3 ABC9-43955400E10
HSCHR22_5_CTG1
f9A43955400E10
-
-
AC254561.1
finished
42887 ABC9 3' / 5'
42887 / 56460
- / 13562
42851
0.41
Identified
2014-10-24
agp2oracle
humpub
 
4 RP4-669P10
HSCHR22_5_CTG1
dJ669P10
EPN details
Submitted to EMBL
12-JAN-09
BX247885.11
finished
133246 RPCI-4        

Statistics

Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
85,157
Total finished length of fin clones w/ overlap
251,792
Total finished length of fin clones w/o overlap
166,635
Total overlap length of fin+unfin clones
85,157
Total finished length of fin+unfin clones w/ overlap
251,792
Total finished length of fin+unfin clones w/o overlap
166,635

Dovetails

# rank accession status length date
1 4 BX247885.11 unfinished 13,562 Thu, 23 Oct 2014 23:32

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