ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_4__22 (TPF updated: 2014-09-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 ABC7-000042402600J17
HSCHR22_4_CTG1
f7A000042402600J17
AC213220.1
finished
2 ABC7-42385400O19
HSCHR22_4_CTG1
f7A42385400O19
AC254560.1
finished
3 RP4-669P10
HSCHR22_4_CTG1
dJ669P10
EPN details
BX247885.11
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 44422 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC213220.1 1 44422 -
44423 56101 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC254560.1 23532 35210 +
56102 156562 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX247885.11 32786 133246 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 ABC7-000042402600J17
HSCHR22_4_CTG1
f7A000042402600J17
-
-
AC213220.1
finished
44422 ABC7 5' / 5'
1 / 23532
- / -
23531
0
Identified
2014-09-23
agp2oracle
humpub
 
2 ABC7-42385400O19
HSCHR22_4_CTG1
f7A42385400O19
-
-
AC254560.1
finished
35210 ABC7 3' / 5'
35210 / 32786
- / -
20622
59.17
Identified
2014-09-23
agp2oracle
humpub
Certificate approved
3 RP4-669P10
HSCHR22_4_CTG1
dJ669P10
EPN details
Submitted to EMBL
12-JAN-09
BX247885.11
finished
133246 RPCI-4        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
44,153
Total finished length of fin clones w/ overlap
212,878
Total finished length of fin clones w/o overlap
168,725
Total overlap length of fin+unfin clones
44,153
Total finished length of fin+unfin clones w/ overlap
212,878
Total finished length of fin+unfin clones w/o overlap
168,725

Search

Search Project, Accession or International clone name:

Select region

Other links

* quick link - http://q.sanger.ac.uk/9hqochfj