ChromoView - clone / Assembly sequencing status

Zebrafish: Sub region GRC__ZEBRAFISH__PLACEHOLDER__8 (TPF updated: 2014-10-01)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH1073-73K19
ctg825_7
zFD73K19
EPN details
FO082035.5
finished
  GAP (type-3) length unknown    
3 CH1073-369E11
ctg10272_7
zFD369E11
EPN details
FQ377911.5
contiguous

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 32371 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 FO082035.5 1 32371 +
32372 82371 2 N 50000 contig no
82372 112948 3 A FQ377911.5 1 30577 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH1073-73K19
ctg825_7
zFD73K19
EPN details
Analysed
26-JAN-13
FO082035.5
finished
32371 CHORI1073        
  GAP (type-3) length unknown                  
3 CH1073-369E11
ctg10272_7
zFD369E11
EPN details
Indexed Manually Improved
05-FEB-14
FQ377911.5
contiguous
30577 CHORI1073        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-3
1
Total clones
2
Clone HTGS Phases
contiguous
1
finished
1
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
32,371
Total finished length of fin clones w/o overlap
32,371
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
62,948
Total finished length of fin+unfin clones w/o overlap
62,948

Search

Search Project, Accession or International clone name:

Select region

Other links

* quick link - http://q.sanger.ac.uk/0559ds3w