ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__1 (TPF updated: 2014-10-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-407H12
Hschr1_alt2_1_ctg32_1
CONTAINER
bA407H12
EPN details
AC138089.2
finished
2 ABC14-50150300K14
Hschr1_alt2_1_ctg32_1
CONTAINED
f14A50150300K14
AC231953.3
finished
1 RP11-407H12
Hschr1_alt2_1_ctg32_1
CONTAINER
bA407H12
EPN details
AC138089.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 43431 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC138089.2 1 43431 +
43432 75589 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC231953.3 1 32158 +
75590 177432 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC138089.2 73145 174987 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-407H12
Hschr1_alt2_1_ctg32_1
CONTAINER
bA407H12
EPN details
Externally Finished
19-JAN-01
AC138089.2
finished
174987 RPCI-11.2 3' / 5'
43431 / 1
101843 / -
32158
8.3
Identified
2014-10-23
fetch_ncbi...
humpub
Certificate approved
2 ABC14-50150300K14
Hschr1_alt2_1_ctg32_1
CONTAINED
f14A50150300K14
-
-
AC231953.3
finished
32158 ABC14 3' / 5'
32158 / 73145
- / 43431
32158
8.3
Identified
2014-10-23
fetch_ncbi...
humpub
Certificate approved
1 RP11-407H12
Hschr1_alt2_1_ctg32_1
CONTAINER
bA407H12
EPN details
Externally Finished
19-JAN-01
AC138089.2
finished
174987 RPCI-11.2        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
29,713
Total finished length of fin clones w/ overlap
207,145
Total finished length of fin clones w/o overlap
177,432
Total overlap length of fin+unfin clones
29,713
Total finished length of fin+unfin clones w/ overlap
207,145
Total finished length of fin+unfin clones w/o overlap
177,432

Dovetails

# rank accession status length date
1 1 AC138089.2 unfinished 101,843 Wed, 22 Oct 2014 23:02

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* quick link - http://q.sanger.ac.uk/50rzhytu