ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_35__19 (TPF updated: 2014-10-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP5-1060P11
HSCHR19KIR_RP5_B_HAP_CTG3_1
Cl/Pr dJ1060P11/1060P11 swap
EPN details
AL133414.5
finished
2 CH17-87E23
HSCHR19KIR_RP5_B_HAP_CTG3_1
bMO87E23
AC245128.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 159169 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AL133414.5 1 159169 -
159170 177381 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AC245128.3 1 18212 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP5-1060P11
HSCHR19KIR_RP5_B_HAP_CTG3_1
Cl/Pr dJ1060P11/1060P11 swap
EPN details
Analysed
02-AUG-13
AL133414.5
finished
159169 RPCI-5 5' / 3'
1 / 18212
- / 50014
113019
71.4
Identified
2014-10-23
fetch_ncbi...
humpub
Certificate approved
2 CH17-87E23
HSCHR19KIR_RP5_B_HAP_CTG3_1
bMO87E23
-
-
AC245128.3
finished
213609 CHORI-17        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
113,019
Total finished length of fin clones w/ overlap
372,778
Total finished length of fin clones w/o overlap
259,759
Total overlap length of fin+unfin clones
113,019
Total finished length of fin+unfin clones w/ overlap
372,778
Total finished length of fin+unfin clones w/o overlap
259,759

Dovetails

# rank accession status length date
1 2 AC245128.3 unfinished 50,014 Wed, 22 Oct 2014 23:38

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