ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_3__11 (TPF updated: 2014-04-17)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-1335O1
Hschr11_3_ctg1
CONTAINER
bA1335O1
EPN details
AP006477.2
finished
2 ABC14-50405300H21
Hschr11_3_ctg1
CONTAINED
f14A50405300H21
AC226006.2
finished
1 RP11-1335O1
Hschr11_3_ctg1
CONTAINER
bA1335O1
EPN details
AP006477.2
finished
3 ABC9-43972000F21
Hschr11_3_ctg1
f9A43972000F21
AC208587.4
finished
4 RP13-870H17
Hschr11_3_ctg1
CONTAINER
bB870H17
EPN details
AC139749.4
finished
5
Hschr11_3_ctg1
CONTAINED
KF455302
KF455302.1
finished
4 RP13-870H17
Hschr11_3_ctg1
CONTAINER
bB870H17
EPN details
AC139749.4
finished

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-1335O1
Hschr11_3_ctg1
CONTAINER
bA1335O1
EPN details
Externally Finished
21-JAN-13
AP006477.2
finished
77332 RPCI-11.5 3' / 5'
23239 / 1
23679 / -
37112
22.73
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
2 ABC14-50405300H21
Hschr11_3_ctg1
CONTAINED
f14A50405300H21
-
-
AC226006.2
finished
37112 ABC14 3' / 5'
37112 / 53654
- / 23239
37112
22.73
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
1 RP11-1335O1
Hschr11_3_ctg1
CONTAINER
bA1335O1
EPN details
Externally Finished
21-JAN-13
AP006477.2
finished
77332 RPCI-11.5 3' / 3'
59580 / 33595
- / -
17752
0.92
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
3 ABC9-43972000F21
Hschr11_3_ctg1
f9A43972000F21
-
-
AC208587.4
finished
33595 ABC9 5' / 3'
1 / 118739
- / -
12936
37.52
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
4 RP13-870H17
Hschr11_3_ctg1
CONTAINER
bB870H17
EPN details
Externally Finished
21-JAN-13
AC139749.4
finished
131676 RPCI-13.4 5' / 5'
12502 / 1
12103 / -
398
0.25
Identified
2014-04-09
agp2oracle
humpub
 
5
Hschr11_3_ctg1
CONTAINED
KF455302
-
-
KF455302.1
finished
398 - 3' / 3'
398 / 12103
- / 119175
398
0.25
Identified
2014-04-09
agp2oracle
humpub
 
4 RP13-870H17
Hschr11_3_ctg1
CONTAINER
bB870H17
EPN details
Externally Finished
21-JAN-13
AC139749.4
finished
131676 RPCI-13.4        

Statistics

Clone Summary

Number of gaps
0
Total clones
5
Clone HTGS Phases
finished
5
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
43,716
Total finished length of fin clones w/ overlap
280,113
Total finished length of fin clones w/o overlap
236,397
Total overlap length of fin+unfin clones
43,716
Total finished length of fin+unfin clones w/ overlap
280,113
Total finished length of fin+unfin clones w/o overlap
236,397

Dovetails

# rank accession status length date
1 1 AP006477.2 unfinished 23,679 Fri, 18 Apr 2014 23:08
2 4 AC139749.4 unfinished 12,103 Fri, 18 Apr 2014 23:08

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Other links

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