ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_23__19 (TPF updated: 2014-09-21)

TPF

# Clone ext/Contig Clone int Acc/Fin
1
HSCHR19KIR_ABC08_A1_hap_CTG3_1
GU182360
GU182360.1
finished
2 CH17-87E23
HSCHR19KIR_ABC08_A1_hap_CTG3_1
bMO87E23
AC245128.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 131486 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 GU182360.1 1 131486 +
131487 190932 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AC245128.3 154164 213609 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1
HSCHR19KIR_ABC08_A1_hap_CTG3_1
GU182360
-
-
GU182360.1
finished
131510 - 3' / 5'
131486 / 154164
24 / 22683
131349
0.44
Identified
2014-09-20
fetch_ncbi...
humpub
 
2 CH17-87E23
HSCHR19KIR_ABC08_A1_hap_CTG3_1
bMO87E23
-
-
AC245128.3
finished
213609 CHORI-17        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
131,349
Total finished length of fin clones w/ overlap
345,119
Total finished length of fin clones w/o overlap
213,770
Total overlap length of fin+unfin clones
131,349
Total finished length of fin+unfin clones w/ overlap
345,119
Total finished length of fin+unfin clones w/o overlap
213,770

Dovetails

# rank accession status length date
1 1 GU182360.1 unfinished 24 Sat, 20 Sep 2014 23:25
2 2 AC245128.3 unfinished 22,683 Sat, 20 Sep 2014 23:25

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Other links

* quick link - http://q.sanger.ac.uk/sc53gb3j