ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_12__19 (TPF updated: 2014-08-02)

TPF

# Clone ext/Contig Clone int Acc/Fin
1
HSCHR19KIR_G085_BA1_hap_CTG3_1
GU182349
GU182349.1
finished
2 CH17-87E23
HSCHR19KIR_G085_BA1_hap_CTG3_1
bMO87E23
AC245128.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 149636 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 GU182349.1 3 149638 -
149637 157053 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AC245128.3 1 7417 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1
HSCHR19KIR_G085_BA1_hap_CTG3_1
GU182349
-
-
GU182349.1
finished
149638 - 5' / 3'
3 / 7417
2 / 42740
131834
38.2
Identified
2014-07-31
fetch_ncbi...
humpub
Certificate approved
2 CH17-87E23
HSCHR19KIR_G085_BA1_hap_CTG3_1
bMO87E23
-
-
AC245128.3
finished
213609 CHORI-17        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
131,834
Total finished length of fin clones w/ overlap
363,247
Total finished length of fin clones w/o overlap
231,413
Total overlap length of fin+unfin clones
131,834
Total finished length of fin+unfin clones w/ overlap
363,247
Total finished length of fin+unfin clones w/o overlap
231,413

Dovetails

# rank accession status length date
1 1 GU182349.1 unfinished 2 Fri, 01 Aug 2014 23:36
2 2 AC245128.3 unfinished 42,740 Fri, 01 Aug 2014 23:36

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* quick link - http://q.sanger.ac.uk/e9eg6c3d