ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_3__22 (TPF updated: 2014-04-24)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP1-186O1
Hschr22_3_ctg1
dJ186O1
EPN details
Z82192.1
finished
2 RP1-257I20
Hschr22_3_ctg1
dJ257I20
EPN details
AL021878.4
finished
3 RP4-669P10
Hschr22_3_ctg1
dJ669P10
EPN details
BX247885.11
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 4504 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 Z82192.1 1 4504 +
4505 42957 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL021878.4 101 38553 +
42958 176203 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 BX247885.11 1 133246 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP1-186O1
Hschr22_3_ctg1
dJ186O1
EPN details
Submitted to EMBL
07-MAY-08
Z82192.1
finished
4504 RPCI-1 3' / 5'
4504 / 101
- / -
100
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
2 RP1-257I20
Hschr22_3_ctg1
dJ257I20
EPN details
Analysed
08-OCT-09
AL021878.4
finished
114846 RPCI-1 3' / 5'
38553 / 1
- / -
76241
16.17
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
3 RP4-669P10
Hschr22_3_ctg1
dJ669P10
EPN details
Submitted to EMBL
12-JAN-09
BX247885.11
finished
133246 RPCI-4        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
76,341
Total finished length of fin clones w/ overlap
252,596
Total finished length of fin clones w/o overlap
176,255
Total overlap length of fin+unfin clones
76,341
Total finished length of fin+unfin clones w/ overlap
252,596
Total finished length of fin+unfin clones w/o overlap
176,255

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Other links

* quick link - http://q.sanger.ac.uk/iyzohcxr