ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__4 (TPF updated: 2014-12-21)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-463J17
HSCHR4_6_CTG12
bA463J17
AF250324.1
finished
2 RP11-521G19
HSCHR4_6_CTG12
bA521G19
AC226374.1
finished
3
HSCHR4_6_CTG12
AF146191
AF146191.1
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 145819 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AF250324.1 1 145819 +
145820 313918 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC226374.1 1 168099 +
313919 378575 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AF146191.1 69318 133974 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-463J17
HSCHR4_6_CTG12
bA463J17
-
-
AF250324.1
finished
245708 RPCI-11.2 3' / 5'
145819 / 1
- / -
99810
4.5
Identified
2014-11-12
fetch_ncbi...
humpub
Certificate submitted, not yet approved
2 RP11-521G19
HSCHR4_6_CTG12
bA521G19
-
-
AC226374.1
finished
168099 RPCI-11.2 3' / 5'
168099 / 69318
- / -
69317
0.03
Identified
2014-11-12
fetch_ncbi...
humpub
 
3
HSCHR4_6_CTG12
AF146191
-
-
AF146191.1
finished
133974 -        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
169,127
Total finished length of fin clones w/ overlap
547,781
Total finished length of fin clones w/o overlap
378,654
Total overlap length of fin+unfin clones
169,127
Total finished length of fin+unfin clones w/ overlap
547,781
Total finished length of fin+unfin clones w/o overlap
378,654

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Other links

* quick link - http://q.sanger.ac.uk/3uua7x2l