ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__7 (TPF updated: 2014-07-30)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 ABC7-481722F1
HSCHR7_2_CTG1
f7A481722F1
AC215522.3
finished
2 RP11-482G13
HSCHR7_2_CTG1
bA482G13
EPN details
AC093666.4
finished
3 RP11-90P13
HSCHR7_2_CTG1
bA90P13
AC093627.4
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 3708 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC215522.3 1 3708 +
3709 16633 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC093666.4 1 12925 +
16634 195902 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC093627.4 1 179269 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 ABC7-481722F1
HSCHR7_2_CTG1
f7A481722F1
-
-
AC215522.3
finished
33901 ABC7 3' / 5'
3708 / 1
- / -
29719
11.14
Identified
2014-07-30
fetch_ncbi...
humpub
Certificate submitted, not yet approved
2 RP11-482G13
HSCHR7_2_CTG1
bA482G13
EPN details
Cancelled
21-JAN-02
AC093666.4
finished
157816 RPCI-11.2 3' / 5'
12925 / 1
- / -
144891
0.22
Identified
2014-07-30
fetch_ncbi...
humpub
Certificate approved
3 RP11-90P13
HSCHR7_2_CTG1
bA90P13
-
-
AC093627.4
finished
179269 RPCI-11.1        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
174,610
Total finished length of fin clones w/ overlap
370,986
Total finished length of fin clones w/o overlap
196,376
Total overlap length of fin+unfin clones
174,610
Total finished length of fin+unfin clones w/ overlap
370,986
Total finished length of fin+unfin clones w/o overlap
196,376

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Other links

* quick link - http://q.sanger.ac.uk/36lnmy6n