ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_7__3 (TPF updated: 2014-07-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-141C7
HSCHR3_8_CTG3
CONTAINER
bA141C7
AC233280.2
finished
2 ABC12-46974400G23
HSCHR3_8_CTG3
CONTAINED
f12A46974400G23
AC237104.4
finished
1 RP11-141C7
HSCHR3_8_CTG3
CONTAINER
bA141C7
AC233280.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 45126 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 1 45126 +
45127 83733 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC237104.4 769 39375 -
83734 166166 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 84528 166960 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-141C7
HSCHR3_8_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1 3' / 3'
45126 / 39375
82834 / -
39375
14.08
Identified
2014-07-23
fetch_ncbi...
humpub
Certificate approved
2 ABC12-46974400G23
HSCHR3_8_CTG3
CONTAINED
f12A46974400G23
-
-
AC237104.4
finished
39375 ABC12 5' / 5'
769 / 84528
- / 45126
39375
14.08
Identified
2014-07-23
fetch_ncbi...
humpub
Certificate approved
1 RP11-141C7
HSCHR3_8_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
36,742
Total finished length of fin clones w/ overlap
206,335
Total finished length of fin clones w/o overlap
169,593
Total overlap length of fin+unfin clones
36,742
Total finished length of fin+unfin clones w/ overlap
206,335
Total finished length of fin+unfin clones w/o overlap
169,593

Dovetails

# rank accession status length date
1 1 AC233280.2 unfinished 82,834 Tue, 22 Jul 2014 23:45

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