ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_4__3 (TPF updated: 2014-08-22)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-141C7
HSCHR3_5_CTG3
CONTAINER
bA141C7
AC233280.2
finished
2 ABC11-48273200H4
HSCHR3_5_CTG3
CONTAINED
f11A48273200H4
AC236675.3
finished
1 RP11-141C7
HSCHR3_5_CTG3
CONTAINER
bA141C7
AC233280.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 45553 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 1 45553 +
45554 83241 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC236675.3 1 37688 -
83242 165186 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 85016 166960 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-141C7
HSCHR3_5_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1 3' / 3'
45553 / 37688
81945 / -
37688
6.18
Identified
2014-08-22
fetch_ncbi...
humpub
Certificate approved
2 ABC11-48273200H4
HSCHR3_5_CTG3
CONTAINED
f11A48273200H4
-
-
AC236675.3
finished
37688 ABC11 5' / 5'
1 / 85016
- / 45553
37688
6.18
Identified
2014-08-22
fetch_ncbi...
humpub
Certificate approved
1 RP11-141C7
HSCHR3_5_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
37,560
Total finished length of fin clones w/ overlap
204,648
Total finished length of fin clones w/o overlap
167,088
Total overlap length of fin+unfin clones
37,560
Total finished length of fin+unfin clones w/ overlap
204,648
Total finished length of fin+unfin clones w/o overlap
167,088

Dovetails

# rank accession status length date
1 1 AC233280.2 unfinished 81,945 Fri, 22 Aug 2014 23:54

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* quick link - http://q.sanger.ac.uk/yqvs72nh