ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__3 (TPF updated: 2014-08-21)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-141C7
HSCHR3_3_CTG3
CONTAINER
bA141C7
AC233280.2
finished
2 ABC9-43943600J2
HSCHR3_3_CTG3
CONTAINED
f9A43943600J2
AC237028.3
finished
1 RP11-141C7
HSCHR3_3_CTG3
CONTAINER
bA141C7
AC233280.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 49614 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 1 49614 +
49615 90747 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC237028.3 1 41133 +
90748 164624 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC233280.2 93084 166960 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-141C7
HSCHR3_3_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1 3' / 5'
49614 / 1
73877 / -
41133
6.83
Identified
2014-08-21
fetch_ncbi...
humpub
Certificate approved
2 ABC9-43943600J2
HSCHR3_3_CTG3
CONTAINED
f9A43943600J2
-
-
AC237028.3
finished
41133 ABC9 3' / 5'
41133 / 93084
- / 49614
41133
6.83
Identified
2014-08-21
fetch_ncbi...
humpub
Certificate approved
1 RP11-141C7
HSCHR3_3_CTG3
CONTAINER
bA141C7
-
-
AC233280.2
finished
166960 RPCI-11.1        

Statistics

Clone Summary

Number of gaps
0
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
41,020
Total finished length of fin clones w/ overlap
208,093
Total finished length of fin clones w/o overlap
167,073
Total overlap length of fin+unfin clones
41,020
Total finished length of fin+unfin clones w/ overlap
208,093
Total finished length of fin+unfin clones w/o overlap
167,073

Dovetails

# rank accession status length date
1 1 AC233280.2 unfinished 73,877 Thu, 21 Aug 2014 00:01

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Other links

* quick link - http://q.sanger.ac.uk/cohnn020