ChromoView - clone / Assembly sequencing status

Human: Sub region UNPL_15 (TPF updated: 2014-10-29)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-116P24
HSCHR15_RANDOM_CTG1
bA116P24
AC136352.10
finished
2 RP11-11H9
HSCHR15_RANDOM_CTG1
bA11H9
AC020679.7
finished
3 RP11-983G14
HSCHR15_RANDOM_CTG1
bA983G14
AC171558.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 177255 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC136352.10 1 177255 -
177256 304569 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC020679.7 1 127314 -
304570 448248 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC171558.2 1 143679 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-116P24
HSCHR15_RANDOM_CTG1
bA116P24
-
-
AC136352.10
finished
177255 RPCI-11.1 5' / 3'
1 / 127314
- / -
25763
0
Identified
2014-10-29
fetch_ncbi...
humpub
 
2 RP11-11H9
HSCHR15_RANDOM_CTG1
bA11H9
-
-
AC020679.7
finished
153077 RPCI-11.1 5' / 3'
1 / 143679
- / -
57586
0
Identified
2014-10-29
fetch_ncbi...
humpub
 
3 RP11-983G14
HSCHR15_RANDOM_CTG1
bA983G14
-
-
AC171558.2
finished
201265 RPCI-11.4        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
83,349
Total finished length of fin clones w/ overlap
531,597
Total finished length of fin clones w/o overlap
448,248
Total overlap length of fin+unfin clones
83,349
Total finished length of fin+unfin clones w/ overlap
531,597
Total finished length of fin+unfin clones w/o overlap
448,248

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Other links

* quick link - http://q.sanger.ac.uk/a9ia84vm