ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__22 (TPF updated: 2014-09-18)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP1-186O1
Hschr22_2_ctg1
dJ186O1
EPN details
Z82192.1
finished
2 RP1-257I20
Hschr22_2_ctg1
dJ257I20
EPN details
AL021878.4
finished
3 ABC8-740722A11
Hschr22_2_ctg1
f8A740722A11
AC236040.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 4504 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 Z82192.1 1 4504 +
4505 37411 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL021878.4 101 33007 +
37412 74113 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AC236040.3 1 36702 -

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP1-186O1
Hschr22_2_ctg1
dJ186O1
EPN details
Submitted to EMBL
07-MAY-08
Z82192.1
finished
4504 RPCI-1 3' / 5'
4504 / 101
- / -
100
0
Identified
2014-09-18
fetch_ncbi...
humpub
 
2 RP1-257I20
Hschr22_2_ctg1
dJ257I20
EPN details
Analysed
08-OCT-09
AL021878.4
finished
114846 RPCI-1 3' / 3'
33007 / 36702
63084 / -
17107
11.83
Identified
2014-09-18
fetch_ncbi...
humpub
Certificate approved
3 ABC8-740722A11
Hschr22_2_ctg1
f8A740722A11
-
-
AC236040.3
finished
36702 ABC8        

Statistics

Clone Summary

Number of gaps
0
Total clones
3
Clone HTGS Phases
finished
3
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
17,207
Total finished length of fin clones w/ overlap
156,052
Total finished length of fin clones w/o overlap
138,845
Total overlap length of fin+unfin clones
17,207
Total finished length of fin+unfin clones w/ overlap
156,052
Total finished length of fin+unfin clones w/o overlap
138,845

Dovetails

# rank accession status length date
1 2 AL021878.4 unfinished 63,084 Thu, 18 Sep 2014 23:39

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