ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__UNPL__4 (TPF updated: 2017-11-17)

TPF

Help

# Clone ext/Contig Clone int Acc/Fin
1 RP23-355O11
Mmchr4un_ctg3
bM355O11
AC087559.69
finished
  GAP (type-3) length unknown    
3 RP23-18C19
Mmchr4un_ctg4
bM18C19
CR974586.23
finished
  GAP (type-3) length unknown    
5 RP24-388E17
Mmchr4un_ctg5
bN388E17
CT868723.17
finished
  GAP (type-3) length unknown    
7
Mmchr4un_ctg6
CAAA01147332
CAAA01147332.1
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 227966 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AC087559.69 1 227966 +
227967 277966 2 N 50000 contig no
277967 485934 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 CR974586.23 1 207968 +
485935 535934 4 N 50000 contig no
535935 727839 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 CT868723.17 1 191905 +
727840 777839 6 N 50000 contig no
777840 779815 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 7 CAAA01147332.1 1 1976 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

Help

Clone Summary

Number of gaps
3
Gap types
type-3
3
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
629,815
Total finished length of fin clones w/o overlap
629,815
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
629,815
Total finished length of fin+unfin clones w/o overlap
629,815

Search

Search Project, Accession or International clone name:

Select region

Other links

Short-link