ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__UNPL__U (TPF updated: 2014-11-27)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 WI1-1536G2
mschrUn_ctg1
fM1536G2
EPN details
CR524822.2
finished
  GAP (type-3) length unknown    
3
mschrUn_ctg2
CAAA01158733
CAAA01158733.1
finished
  GAP (type-2) length 828 bps    
5
mschrUn_ctg2
CAAA01133020
CAAA01133020.1
finished
  GAP (type-2) length 100 bps    
7
mschrUn_ctg2
CAAA01079722
CAAA01079722.1
finished
  GAP (type-2) length 504 bps    
9
mschrUn_ctg2
CAAA01198453
CAAA01198453.1
finished
  GAP (type-3) length unknown    
11
mschrUn_ctg3
CAAA01118654
CAAA01118654.1
finished
  GAP (type-2) length 1079 bps    
13
mschrUn_ctg3
CAAA01184670
CAAA01184670.1
finished
  GAP (type-2) length 100 bps    
15
mschrUn_ctg3
CAAA01098243
CAAA01098243.1
finished
  GAP (type-3) length unknown    
17
mschrUn_ctg4
CAAA01064568
CAAA01064568.1
finished
  GAP (type-2) length 337 bps    
19
mschrUn_ctg4
CAAA01064566
CAAA01064566.1
finished
  GAP (type-2) length 2197 bps    
21
mschrUn_ctg4
CAAA01064564
CAAA01064564.1
finished
  GAP (type-2) length 721 bps    
23
mschrUn_ctg4
CAAA01064562
CAAA01064562.1
finished
  GAP (type-2) length 667 bps    
25
mschrUn_ctg4
CAAA01064559
CAAA01064559.1
finished
  GAP (type-2) length 1194 bps    
27
mschrUn_ctg4
CAAA01201158
CAAA01201158.1
finished
  GAP (type-3) length unknown    
29
mschrUn_ctg5
CAAA01112889
CAAA01112889.1
finished
  GAP (type-2) length 778 bps    
31
mschrUn_ctg5
CAAA01112892
CAAA01112892.1
finished
  GAP (type-3) length unknown    
33
mschrUn_ctg6
CAAA01121767
CAAA01121767.1
finished
  GAP (type-2) length 100 bps    
35
mschrUn_ctg6
CAAA01180505
CAAA01180505.1
finished
  GAP (type-2) length 100 bps    
37
mschrUn_ctg6
CAAA01094994
CAAA01094994.1
finished
  GAP (type-2) length 100 bps    
39
mschrUn_ctg6
CAAA01088797
CAAA01088797.1
finished
  GAP (type-2) length 516 bps    
41
mschrUn_ctg6
CAAA01094998
CAAA01094998.1
finished
  GAP (type-2) length 989 bps    
43
mschrUn_ctg6
CAAA01095002
CAAA01095002.1
finished
  GAP (type-2) length 100 bps    
45
mschrUn_ctg6
CAAA01095006
CAAA01095006.1
finished
  GAP (type-2) length 1775 bps    
47
mschrUn_ctg6
CAAA01169775
CAAA01169775.1
finished
  GAP (type-2) length 1101 bps    
49
mschrUn_ctg6
CAAA01095009
CAAA01095009.1
finished
  GAP (type-2) length 381 bps    
51
mschrUn_ctg6
CAAA01204277
CAAA01204277.1
finished
  GAP (type-2) length 953 bps    
53
mschrUn_ctg6
CAAA01095012
CAAA01095012.1
finished
  GAP (type-2) length 1343 bps    
55
mschrUn_ctg6
CAAA01095016
CAAA01095016.1
finished
  GAP (type-3) length unknown    
57
mschrUn_ctg7
CAAA01161649
CAAA01161649.1
finished
  GAP (type-2) length 100 bps    
59
mschrUn_ctg7
CAAA01205117
CAAA01205117.1
finished
  GAP (type-3) length unknown    
61
mschrUn_ctg9
CAAA01106260
CAAA01106260.1
finished
  GAP (type-2) length 3198 bps    
63
mschrUn_ctg9
CAAA01095281
CAAA01095281.1
finished
  GAP (type-2) length 2397 bps    
65
mschrUn_ctg9
CAAA01132421
CAAA01132421.1
finished
  GAP (type-2) length 2972 bps    
67
mschrUn_ctg9
CAAA01132427
CAAA01132427.1
finished
  GAP (type-2) length 1235 bps    
69
mschrUn_ctg9
CAAA01132430
CAAA01132430.1
finished
  GAP (type-2) length 607 bps    
71
mschrUn_ctg9
CAAA01132433
CAAA01132433.1
finished
  GAP (type-2) length 1111 bps    
73
mschrUn_ctg9
CAAA01132436
CAAA01132436.1
finished
  GAP (type-3) length unknown    
75
mschrUn_ctg10
CAAA01097992
CAAA01097992.1
finished
  GAP (type-2) length 362 bps    
77
mschrUn_ctg10
CAAA01211373
CAAA01211373.1
finished
  GAP (type-2) length 100 bps    
79
mschrUn_ctg10
CAAA01204266
CAAA01204266.1
finished
  GAP (type-3) length unknown    
81
mschrUn_ctg11
CAAA01085004
CAAA01085004.1
finished
  GAP (type-2) length 2530 bps    
83
mschrUn_ctg11
CAAA01116557
CAAA01116557.1
finished
  GAP (type-2) length 100 bps    
85
mschrUn_ctg11
CAAA01116553
CAAA01116553.1
finished
  GAP (type-2) length 100 bps    
87
mschrUn_ctg11
CAAA01116549
CAAA01116549.1
finished
  GAP (type-2) length 457 bps    
89
mschrUn_ctg11
CAAA01125004
CAAA01125004.1
finished
  GAP (type-2) length 838 bps    
91
mschrUn_ctg11
CAAA01092978
CAAA01092978.1
finished
  GAP (type-2) length 107 bps    
93
mschrUn_ctg11
CAAA01092974
CAAA01092974.1
finished
  GAP (type-2) length 339 bps    
95
mschrUn_ctg11
CAAA01087571
CAAA01087571.1
finished
  GAP (type-2) length 100 bps    
97
mschrUn_ctg11
CAAA01092971
CAAA01092971.1
finished
  GAP (type-2) length 100 bps    
99
mschrUn_ctg11
CAAA01184142
CAAA01184142.1
finished
  GAP (type-2) length 100 bps    
101
mschrUn_ctg11
CAAA01092966
CAAA01092966.1
finished
  GAP (type-3) length unknown    
103
mschrUn_ctg12
CAAA01149061
CAAA01149061.1
finished
  GAP (type-2) length 1578 bps    
105
mschrUn_ctg12
CAAA01106144
CAAA01106144.1
finished
  GAP (type-2) length 1081 bps    
107
mschrUn_ctg12
CAAA01106146
CAAA01106146.1
finished
  GAP (type-3) length unknown    
109
mschrUn_ctg13
CAAA01204351
CAAA01204351.1
finished
  GAP (type-2) length 100 bps    
111
mschrUn_ctg13
CAAA01200547
CAAA01200547.1
finished
  GAP (type-3) length unknown    
113
mschrUn_ctg14
CAAA01117087
CAAA01117087.1
finished
  GAP (type-2) length 100 bps    
115
mschrUn_ctg14
CAAA01117091
CAAA01117091.1
finished
  GAP (type-2) length 162 bps    
117
mschrUn_ctg14
CAAA01181301
CAAA01181301.1
finished
  GAP (type-2) length 100 bps    
119
mschrUn_ctg14
CAAA01211051
CAAA01211051.1
finished
  GAP (type-3) length unknown    
121
mschrUn_ctg15
CAAA01199632
CAAA01199632.1
finished
  GAP (type-2) length 491 bps    
123
mschrUn_ctg15
CAAA01134628
CAAA01134628.1
finished
  GAP (type-2) length 244 bps    
125
mschrUn_ctg15
CAAA01208629
CAAA01208629.1
finished
  GAP (type-3) length unknown    
127
mschrUn_ctg16
CAAA01210703
CAAA01210703.1
finished
  GAP (type-2) length 1015 bps    
129
mschrUn_ctg16
CAAA01156884
CAAA01156884.1
finished
  GAP (type-2) length 100 bps    
131
mschrUn_ctg16
CAAA01098150
CAAA01098150.1
finished
  GAP (type-2) length 1800 bps    
133
mschrUn_ctg16
CAAA01131957
CAAA01131957.1
finished
  GAP (type-2) length 933 bps    
135
mschrUn_ctg16
CAAA01214547
CAAA01214547.1
finished
  GAP (type-2) length 1399 bps    
137
mschrUn_ctg16
CAAA01183943
CAAA01183943.1
finished
  GAP (type-3) length unknown    
139
mschrUn_ctg17
CAAA01132901
CAAA01132901.1
finished
  GAP (type-2) length 1517 bps    
141
mschrUn_ctg17
CAAA01096394
CAAA01096394.1
finished
  GAP (type-2) length 1536 bps    
143
mschrUn_ctg17
CAAA01152989
CAAA01152989.1
finished
  GAP (type-3) length unknown    
145
mschrUn_ctg18
CAAA01159653
CAAA01159653.1
finished
  GAP (type-2) length 100 bps    
147
mschrUn_ctg18
CAAA01140686
CAAA01140686.1
finished
  GAP (type-2) length 100 bps    
149
mschrUn_ctg18
CAAA01204303
CAAA01204303.1
finished
  GAP (type-2) length 1054 bps    
151
mschrUn_ctg18
CAAA01106128
CAAA01106128.1
finished
  GAP (type-2) length 100 bps    
153
mschrUn_ctg18
CAAA01106131
CAAA01106131.1
finished
  GAP (type-2) length 1659 bps    
155
mschrUn_ctg18
CAAA01106134
CAAA01106134.1
finished
  GAP (type-2) length 100 bps    
157
mschrUn_ctg18
CAAA01106137
CAAA01106137.1
finished
  GAP (type-2) length 100 bps    
159
mschrUn_ctg18
CAAA01153862
CAAA01153862.1
finished
  GAP (type-2) length 100 bps    
161
mschrUn_ctg18
CAAA01184187
CAAA01184187.1
finished
  GAP (type-2) length 100 bps    
163
mschrUn_ctg18
CAAA01106141
CAAA01106141.1
finished
  GAP (type-3) length unknown    
165
mschrUn_ctg19
CAAA01120220
CAAA01120220.1
finished
  GAP (type-2) length 1357 bps    
167
mschrUn_ctg19
CAAA01147314
CAAA01147314.1
finished
  GAP (type-2) length 1807 bps    
169
mschrUn_ctg19
CAAA01170222
CAAA01170222.1
finished
  GAP (type-2) length 1389 bps    
171
mschrUn_ctg19
CAAA01213144
CAAA01213144.1
finished
  GAP (type-2) length 1475 bps    
173
mschrUn_ctg19
CAAA01120223
CAAA01120223.1
finished
  GAP (type-3) length unknown    
175
mschrUn_ctg20
CAAA01098558
CAAA01098558.1
finished
  GAP (type-2) length 100 bps    
177
mschrUn_ctg20
CAAA01134581
CAAA01134581.1
finished
  GAP (type-2) length 100 bps    
179
mschrUn_ctg20
CAAA01124692
CAAA01124692.1
finished
  GAP (type-2) length 2105 bps    
181
mschrUn_ctg20
CAAA01150704
CAAA01150704.1
finished
  GAP (type-3) length unknown    
183
mschrUn_ctg21
CAAA01171143
CAAA01171143.1
finished
  GAP (type-2) length 1999 bps    
185
mschrUn_ctg21
CAAA01111687
CAAA01111687.1
finished
  GAP (type-2) length 3375 bps    
187
mschrUn_ctg21
CAAA01153724
CAAA01153724.1
finished
  GAP (type-3) length unknown    
189
mschrUn_ctg22
CAAA01203092
CAAA01203092.1
finished
  GAP (type-2) length 319 bps    
191
mschrUn_ctg22
CAAA01189579
CAAA01189579.1
finished
  GAP (type-3) length unknown    
193 RP24-130G10
mschrUn_ctg23
bN130G10
AC149090.2
finished
  GAP (type-3) length unknown    
195 RP23-225M6
mschrUn_ctg24
bM225M6
AF441733.2
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 40056 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 CR524822.2 1 40056 +
40057 90056 2 N 50000 contig no
90057 124221 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 CAAA01158733.1 1 34165 +
124222 125049 4 N 828 contig yes # PAIRED ENDS
125050 126732 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 CAAA01133020.1 1 1683 +
126733 126832 6 N 100 contig yes # PAIRED ENDS
126833 128269 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 7 CAAA01079722.1 1 1437 +
128270 128773 8 N 504 contig yes # PAIRED ENDS
128774 132113 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 9 - 9 CAAA01198453.1 1 3340 +
132114 182113 10 N 50000 contig no
182114 183673 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 11 - 11 CAAA01118654.1 1 1560 +
183674 184752 12 N 1079 contig yes # PAIRED ENDS
184753 189236 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 13 - 13 CAAA01184670.1 1 4484 +
189237 189336 14 N 100 contig yes # PAIRED ENDS
189337 213715 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 15 - 15 CAAA01098243.1 1 24379 +
213716 263715 16 N 50000 contig no
263716 265927 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 CAAA01064568.1 1 2212 +
265928 266264 18 N 337 contig yes # PAIRED ENDS
266265 276177 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 19 CAAA01064566.1 1 9913 +
276178 278374 20 N 2197 contig yes # PAIRED ENDS
278375 280899 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 21 CAAA01064564.1 1 2525 +
280900 281620 22 N 721 contig yes # PAIRED ENDS
281621 284504 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 23 - 23 CAAA01064562.1 1 2884 +
284505 285171 24 N 667 contig yes # PAIRED ENDS
285172 287280 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 25 - 25 CAAA01064559.1 1 2109 +
287281 288474 26 N 1194 contig yes # PAIRED ENDS
288475 289586 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 27 - 27 CAAA01201158.1 1 1112 +
289587 339586 28 N 50000 contig no
339587 357091 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 29 CAAA01112889.1 1 17505 +
357092 357869 30 N 778 contig yes # PAIRED ENDS
357870 362744 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 31 - 31 CAAA01112892.1 1 4875 +
362745 412744 32 N 50000 contig no
412745 417965 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 33 CAAA01121767.1 1 5221 +
417966 418065 34 N 100 contig yes # PAIRED ENDS
418066 422604 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 35 CAAA01180505.1 1 4539 +
422605 422704 36 N 100 contig yes # PAIRED ENDS
422705 425730 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 37 CAAA01094994.1 1 3026 +
425731 425830 38 N 100 contig yes # PAIRED ENDS
425831 426712 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 39 - 39 CAAA01088797.1 1 882 +
426713 427228 40 N 516 contig yes # PAIRED ENDS
427229 429369 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 41 CAAA01094998.1 1 2141 +
429370 430358 42 N 989 contig yes # PAIRED ENDS
430359 431899 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 43 CAAA01095002.1 1 1541 +
431900 431999 44 N 100 contig yes # PAIRED ENDS
432000 433341 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 45 - 45 CAAA01095006.1 1 1342 +
433342 435116 46 N 1775 contig yes # PAIRED ENDS
435117 438621 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 47 - 47 CAAA01169775.1 1 3505 +
438622 439722 48 N 1101 contig yes # PAIRED ENDS
439723 442883 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 49 CAAA01095009.1 1 3161 +
442884 443264 50 N 381 contig yes # PAIRED ENDS
443265 445534 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 51 CAAA01204277.1 1 2270 +
445535 446487 52 N 953 contig yes # PAIRED ENDS
446488 448564 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 53 CAAA01095012.1 1 2077 +
448565 449907 54 N 1343 contig yes # PAIRED ENDS
449908 451403 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 55 CAAA01095016.1 1 1496 +
451404 501403 56 N 50000 contig no
501404 521501 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 57 CAAA01161649.1 1 20098 +
521502 521601 58 N 100 contig yes # PAIRED ENDS
521602 536643 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 59 - 59 CAAA01205117.1 1 15042 +
536644 586643 60 N 50000 contig no
586644 587306 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 61 CAAA01106260.1 1 663 +
587307 590504 62 N 3198 contig yes # PAIRED ENDS
590505 593778 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 63 CAAA01095281.1 1 3274 +
593779 596175 64 N 2397 contig yes # PAIRED ENDS
596176 597495 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 65 CAAA01132421.1 1 1320 +
597496 600467 66 N 2972 contig yes # PAIRED ENDS
600468 602901 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 67 CAAA01132427.1 1 2434 +
602902 604136 68 N 1235 contig yes # PAIRED ENDS
604137 606324 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 69 CAAA01132430.1 1 2188 +
606325 606931 70 N 607 contig yes # PAIRED ENDS
606932 608814 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 71 CAAA01132433.1 1 1883 +
608815 609925 72 N 1111 contig yes # PAIRED ENDS
609926 611311 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 73 CAAA01132436.1 1 1386 +
611312 661311 74 N 50000 contig no
661312 663945 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 75 - 75 CAAA01097992.1 1 2634 +
663946 664307 76 N 362 contig yes # PAIRED ENDS
664308 669695 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 77 CAAA01211373.1 1 5388 +
669696 669795 78 N 100 contig yes # PAIRED ENDS
669796 684940 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 79 - 79 CAAA01204266.1 1 15145 +
684941 734940 80 N 50000 contig no
734941 737359 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 81 - 81 CAAA01085004.1 1 2419 +
737360 739889 82 N 2530 contig yes # PAIRED ENDS
739890 743154 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 83 - 83 CAAA01116557.1 1 3265 +
743155 743254 84 N 100 contig yes # PAIRED ENDS
743255 744266 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 85 - 85 CAAA01116553.1 1 1012 +
744267 744366 86 N 100 contig yes # PAIRED ENDS
744367 746402 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 87 CAAA01116549.1 1 2036 +
746403 746859 88 N 457 contig yes # PAIRED ENDS
746860 767596 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 89 CAAA01125004.1 1 20737 +
767597 768434 90 N 838 contig yes # PAIRED ENDS
768435 769428 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 91 CAAA01092978.1 1 994 +
769429 769535 92 N 107 contig yes # PAIRED ENDS
769536 773119 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 93 CAAA01092974.1 1 3584 +
773120 773458 94 N 339 contig yes # PAIRED ENDS
773459 776893 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 95 - 95 CAAA01087571.1 1 3435 +
776894 776993 96 N 100 contig yes # PAIRED ENDS
776994 782074 97 FClick to retrieve finished assembled sequence in green bar: rank(s) 97 - 97 CAAA01092971.1 1 5081 +
782075 782174 98 N 100 contig yes # PAIRED ENDS
782175 788727 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 99 - 99 CAAA01184142.1 1 6553 +
788728 788827 100 N 100 contig yes # PAIRED ENDS
788828 790651 101 FClick to retrieve finished assembled sequence in green bar: rank(s) 101 - 101 CAAA01092966.1 1 1824 +
790652 840651 102 N 50000 contig no
840652 841685 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 103 - 103 CAAA01149061.1 1 1034 +
841686 843263 104 N 1578 contig yes # PAIRED ENDS
843264 861547 105 FClick to retrieve finished assembled sequence in green bar: rank(s) 105 - 105 CAAA01106144.1 1 18284 +
861548 862628 106 N 1081 contig yes # PAIRED ENDS
862629 864974 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 107 - 107 CAAA01106146.1 1 2346 +
864975 914974 108 N 50000 contig no
914975 922893 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 109 - 109 CAAA01204351.1 1 7919 +
922894 922993 110 N 100 contig yes # PAIRED ENDS
922994 937948 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 111 - 111 CAAA01200547.1 1 14955 +
937949 987948 112 N 50000 contig no
987949 990024 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 113 - 113 CAAA01117087.1 1 2076 +
990025 990124 114 N 100 contig yes # PAIRED ENDS
990125 992187 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 115 - 115 CAAA01117091.1 1 2063 +
992188 992349 116 N 162 contig yes # PAIRED ENDS
992350 1009775 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 117 - 117 CAAA01181301.1 1 17426 +
1009776 1009875 118 N 100 contig yes # PAIRED ENDS
1009876 1019652 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 119 - 119 CAAA01211051.1 1 9777 +
1019653 1069652 120 N 50000 contig no
1069653 1077381 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 121 CAAA01199632.1 1 7729 +
1077382 1077872 122 N 491 contig yes # PAIRED ENDS
1077873 1081348 123 FClick to retrieve finished assembled sequence in green bar: rank(s) 123 - 123 CAAA01134628.1 1 3476 +
1081349 1081592 124 N 244 contig yes # PAIRED ENDS
1081593 1090892 125 FClick to retrieve finished assembled sequence in green bar: rank(s) 125 - 125 CAAA01208629.1 1 9300 +
1090893 1140892 126 N 50000 contig no
1140893 1148933 127 FClick to retrieve finished assembled sequence in green bar: rank(s) 127 - 127 CAAA01210703.1 1 8041 +
1148934 1149948 128 N 1015 contig yes # PAIRED ENDS
1149949 1152826 129 FClick to retrieve finished assembled sequence in green bar: rank(s) 129 - 129 CAAA01156884.1 1 2878 +
1152827 1152926 130 N 100 contig yes # PAIRED ENDS
1152927 1155134 131 FClick to retrieve finished assembled sequence in green bar: rank(s) 131 - 131 CAAA01098150.1 1 2208 +
1155135 1156934 132 N 1800 contig yes # PAIRED ENDS
1156935 1162290 133 FClick to retrieve finished assembled sequence in green bar: rank(s) 133 - 133 CAAA01131957.1 1 5356 +
1162291 1163223 134 N 933 contig yes # PAIRED ENDS
1163224 1166241 135 FClick to retrieve finished assembled sequence in green bar: rank(s) 135 - 135 CAAA01214547.1 1 3018 +
1166242 1167640 136 N 1399 contig yes # PAIRED ENDS
1167641 1169556 137 FClick to retrieve finished assembled sequence in green bar: rank(s) 137 - 137 CAAA01183943.1 1 1916 +
1169557 1219556 138 N 50000 contig no
1219557 1225493 139 FClick to retrieve finished assembled sequence in green bar: rank(s) 139 - 139 CAAA01132901.1 1 5937 +
1225494 1227010 140 N 1517 contig yes # PAIRED ENDS
1227011 1228931 141 FClick to retrieve finished assembled sequence in green bar: rank(s) 141 - 141 CAAA01096394.1 1 1921 +
1228932 1230467 142 N 1536 contig yes # PAIRED ENDS
1230468 1244241 143 FClick to retrieve finished assembled sequence in green bar: rank(s) 143 - 143 CAAA01152989.1 1 13774 +
1244242 1294241 144 N 50000 contig no
1294242 1297856 145 FClick to retrieve finished assembled sequence in green bar: rank(s) 145 - 145 CAAA01159653.1 1 3615 +
1297857 1297956 146 N 100 contig yes # PAIRED ENDS
1297957 1299804 147 FClick to retrieve finished assembled sequence in green bar: rank(s) 147 - 147 CAAA01140686.1 1 1848 +
1299805 1299904 148 N 100 contig yes # PAIRED ENDS
1299905 1301317 149 FClick to retrieve finished assembled sequence in green bar: rank(s) 149 - 149 CAAA01204303.1 1 1413 +
1301318 1302371 150 N 1054 contig yes # PAIRED ENDS
1302372 1304471 151 FClick to retrieve finished assembled sequence in green bar: rank(s) 151 - 151 CAAA01106128.1 1 2100 +
1304472 1304571 152 N 100 contig yes # PAIRED ENDS
1304572 1308206 153 FClick to retrieve finished assembled sequence in green bar: rank(s) 153 - 153 CAAA01106131.1 1 3635 +
1308207 1309865 154 N 1659 contig yes # PAIRED ENDS
1309866 1310634 155 FClick to retrieve finished assembled sequence in green bar: rank(s) 155 - 155 CAAA01106134.1 1 769 +
1310635 1310734 156 N 100 contig yes # PAIRED ENDS
1310735 1312438 157 FClick to retrieve finished assembled sequence in green bar: rank(s) 157 - 157 CAAA01106137.1 1 1704 +
1312439 1312538 158 N 100 contig yes # PAIRED ENDS
1312539 1314462 159 FClick to retrieve finished assembled sequence in green bar: rank(s) 159 - 159 CAAA01153862.1 1 1924 +
1314463 1314562 160 N 100 contig yes # PAIRED ENDS
1314563 1320158 161 FClick to retrieve finished assembled sequence in green bar: rank(s) 161 - 161 CAAA01184187.1 1 5596 +
1320159 1320258 162 N 100 contig yes # PAIRED ENDS
1320259 1323013 163 FClick to retrieve finished assembled sequence in green bar: rank(s) 163 - 163 CAAA01106141.1 1 2755 +
1323014 1373013 164 N 50000 contig no
1373014 1375492 165 FClick to retrieve finished assembled sequence in green bar: rank(s) 165 - 165 CAAA01120220.1 1 2479 +
1375493 1376849 166 N 1357 contig yes # PAIRED ENDS
1376850 1382419 167 FClick to retrieve finished assembled sequence in green bar: rank(s) 167 - 167 CAAA01147314.1 1 5570 +
1382420 1384226 168 N 1807 contig yes # PAIRED ENDS
1384227 1392982 169 FClick to retrieve finished assembled sequence in green bar: rank(s) 169 - 169 CAAA01170222.1 1 8756 +
1392983 1394371 170 N 1389 contig yes # PAIRED ENDS
1394372 1396300 171 FClick to retrieve finished assembled sequence in green bar: rank(s) 171 - 171 CAAA01213144.1 1 1929 +
1396301 1397775 172 N 1475 contig yes # PAIRED ENDS
1397776 1399777 173 FClick to retrieve finished assembled sequence in green bar: rank(s) 173 - 173 CAAA01120223.1 1 2002 +
1399778 1449777 174 N 50000 contig no
1449778 1484397 175 FClick to retrieve finished assembled sequence in green bar: rank(s) 175 - 175 CAAA01098558.1 1 34620 +
1484398 1484497 176 N 100 contig yes # PAIRED ENDS
1484498 1492279 177 FClick to retrieve finished assembled sequence in green bar: rank(s) 177 - 177 CAAA01134581.1 1 7782 +
1492280 1492379 178 N 100 contig yes # PAIRED ENDS
1492380 1494693 179 FClick to retrieve finished assembled sequence in green bar: rank(s) 179 - 179 CAAA01124692.1 1 2314 +
1494694 1496798 180 N 2105 contig yes # PAIRED ENDS
1496799 1522162 181 FClick to retrieve finished assembled sequence in green bar: rank(s) 181 - 181 CAAA01150704.1 1 25364 +
1522163 1572162 182 N 50000 contig no
1572163 1601630 183 FClick to retrieve finished assembled sequence in green bar: rank(s) 183 - 183 CAAA01171143.1 1 29468 +
1601631 1603629 184 N 1999 contig yes # PAIRED ENDS
1603630 1612082 185 FClick to retrieve finished assembled sequence in green bar: rank(s) 185 - 185 CAAA01111687.1 1 8453 +
1612083 1615457 186 N 3375 contig yes # PAIRED ENDS
1615458 1619235 187 FClick to retrieve finished assembled sequence in green bar: rank(s) 187 - 187 CAAA01153724.1 1 3778 +
1619236 1669235 188 N 50000 contig no
1669236 1683175 189 FClick to retrieve finished assembled sequence in green bar: rank(s) 189 - 189 CAAA01203092.1 1 13940 +
1683176 1683494 190 N 319 contig yes # PAIRED ENDS
1683495 1689443 191 FClick to retrieve finished assembled sequence in green bar: rank(s) 191 - 191 CAAA01189579.1 1 5949 +
1689444 1739443 192 N 50000 contig no
1739444 1853895 193 FClick to retrieve finished assembled sequence in green bar: rank(s) 193 - 193 AC149090.2 1 114452 +
1853896 1903895 194 N 50000 contig no
1903896 1935024 195 FClick to retrieve finished assembled sequence in green bar: rank(s) 195 - 195 AF441733.2 1 31129 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 WI1-1536G2
mschrUn_ctg1
fM1536G2
EPN details
Analysed
08-JUL-04
CR524822.2
finished
40056 Whitehead mouse fosmid        
  GAP (type-3) length unknown                  
3
mschrUn_ctg2
CAAA01158733
-
-
CAAA01158733.1
finished
34165 -        
  GAP (type-2) length 828 bps                  
5
mschrUn_ctg2
CAAA01133020
-
-
CAAA01133020.1
finished
1683 -        
  GAP (type-2) length 100 bps                  
7
mschrUn_ctg2
CAAA01079722
-
-
CAAA01079722.1
finished
1437 -        
  GAP (type-2) length 504 bps                  
9
mschrUn_ctg2
CAAA01198453
-
-
CAAA01198453.1
finished
3340 -        
  GAP (type-3) length unknown                  
11
mschrUn_ctg3
CAAA01118654
-
-
CAAA01118654.1
finished
1560 -        
  GAP (type-2) length 1079 bps                  
13
mschrUn_ctg3
CAAA01184670
-
-
CAAA01184670.1
finished
4484 -        
  GAP (type-2) length 100 bps                  
15
mschrUn_ctg3
CAAA01098243
-
-
CAAA01098243.1
finished
24379 -        
  GAP (type-3) length unknown                  
17
mschrUn_ctg4
CAAA01064568
-
-
CAAA01064568.1
finished
2212 -        
  GAP (type-2) length 337 bps                  
19
mschrUn_ctg4
CAAA01064566
-
-
CAAA01064566.1
finished
9913 -        
  GAP (type-2) length 2197 bps                  
21
mschrUn_ctg4
CAAA01064564
-
-
CAAA01064564.1
finished
2525 -        
  GAP (type-2) length 721 bps                  
23
mschrUn_ctg4
CAAA01064562
-
-
CAAA01064562.1
finished
2884 -        
  GAP (type-2) length 667 bps                  
25
mschrUn_ctg4
CAAA01064559
-
-
CAAA01064559.1
finished
2109 -        
  GAP (type-2) length 1194 bps                  
27
mschrUn_ctg4
CAAA01201158
-
-
CAAA01201158.1
finished
1112 -        
  GAP (type-3) length unknown                  
29
mschrUn_ctg5
CAAA01112889
-
-
CAAA01112889.1
finished
17505 -        
  GAP (type-2) length 778 bps                  
31
mschrUn_ctg5
CAAA01112892
-
-
CAAA01112892.1
finished
4875 -        
  GAP (type-3) length unknown                  
33
mschrUn_ctg6
CAAA01121767
-
-
CAAA01121767.1
finished
5221 -        
  GAP (type-2) length 100 bps                  
35
mschrUn_ctg6
CAAA01180505
-
-
CAAA01180505.1
finished
4539 -        
  GAP (type-2) length 100 bps                  
37
mschrUn_ctg6
CAAA01094994
-
-
CAAA01094994.1
finished
3026 -        
  GAP (type-2) length 100 bps                  
39
mschrUn_ctg6
CAAA01088797
-
-
CAAA01088797.1
finished
882 -        
  GAP (type-2) length 516 bps                  
41
mschrUn_ctg6
CAAA01094998
-
-
CAAA01094998.1
finished
2141 -        
  GAP (type-2) length 989 bps                  
43
mschrUn_ctg6
CAAA01095002
-
-
CAAA01095002.1
finished
1541 -        
  GAP (type-2) length 100 bps                  
45
mschrUn_ctg6
CAAA01095006
-
-
CAAA01095006.1
finished
1342 -        
  GAP (type-2) length 1775 bps                  
47
mschrUn_ctg6
CAAA01169775
-
-
CAAA01169775.1
finished
3505 -        
  GAP (type-2) length 1101 bps                  
49
mschrUn_ctg6
CAAA01095009
-
-
CAAA01095009.1
finished
3161 -        
  GAP (type-2) length 381 bps                  
51
mschrUn_ctg6
CAAA01204277
-
-
CAAA01204277.1
finished
2270 -        
  GAP (type-2) length 953 bps                  
53
mschrUn_ctg6
CAAA01095012
-
-
CAAA01095012.1
finished
2077 -        
  GAP (type-2) length 1343 bps                  
55
mschrUn_ctg6
CAAA01095016
-
-
CAAA01095016.1
finished
1496 -        
  GAP (type-3) length unknown                  
57
mschrUn_ctg7
CAAA01161649
-
-
CAAA01161649.1
finished
20098 -        
  GAP (type-2) length 100 bps                  
59
mschrUn_ctg7
CAAA01205117
-
-
CAAA01205117.1
finished
15042 -        
  GAP (type-3) length unknown                  
61
mschrUn_ctg9
CAAA01106260
-
-
CAAA01106260.1
finished
663 -        
  GAP (type-2) length 3198 bps                  
63
mschrUn_ctg9
CAAA01095281
-
-
CAAA01095281.1
finished
3274 -        
  GAP (type-2) length 2397 bps                  
65
mschrUn_ctg9
CAAA01132421
-
-
CAAA01132421.1
finished
1320 -        
  GAP (type-2) length 2972 bps                  
67
mschrUn_ctg9
CAAA01132427
-
-
CAAA01132427.1
finished
2434 -        
  GAP (type-2) length 1235 bps                  
69
mschrUn_ctg9
CAAA01132430
-
-
CAAA01132430.1
finished
2188 -        
  GAP (type-2) length 607 bps                  
71
mschrUn_ctg9
CAAA01132433
-
-
CAAA01132433.1
finished
1883 -        
  GAP (type-2) length 1111 bps                  
73
mschrUn_ctg9
CAAA01132436
-
-
CAAA01132436.1
finished
1386 -        
  GAP (type-3) length unknown                  
75
mschrUn_ctg10
CAAA01097992
-
-
CAAA01097992.1
finished
2634 -        
  GAP (type-2) length 362 bps                  
77
mschrUn_ctg10
CAAA01211373
-
-
CAAA01211373.1
finished
5388 -        
  GAP (type-2) length 100 bps                  
79
mschrUn_ctg10
CAAA01204266
-
-
CAAA01204266.1
finished
15145 -        
  GAP (type-3) length unknown                  
81
mschrUn_ctg11
CAAA01085004
-
-
CAAA01085004.1
finished
2419 -        
  GAP (type-2) length 2530 bps                  
83
mschrUn_ctg11
CAAA01116557
-
-
CAAA01116557.1
finished
3265 -        
  GAP (type-2) length 100 bps                  
85
mschrUn_ctg11
CAAA01116553
-
-
CAAA01116553.1
finished
1012 -        
  GAP (type-2) length 100 bps                  
87
mschrUn_ctg11
CAAA01116549
-
-
CAAA01116549.1
finished
2036 -        
  GAP (type-2) length 457 bps                  
89
mschrUn_ctg11
CAAA01125004
-
-
CAAA01125004.1
finished
20737 -        
  GAP (type-2) length 838 bps                  
91
mschrUn_ctg11
CAAA01092978
-
-
CAAA01092978.1
finished
994 -        
  GAP (type-2) length 107 bps                  
93
mschrUn_ctg11
CAAA01092974
-
-
CAAA01092974.1
finished
3584 -        
  GAP (type-2) length 339 bps                  
95
mschrUn_ctg11
CAAA01087571
-
-
CAAA01087571.1
finished
3435 -        
  GAP (type-2) length 100 bps                  
97
mschrUn_ctg11
CAAA01092971
-
-
CAAA01092971.1
finished
5081 -        
  GAP (type-2) length 100 bps                  
99
mschrUn_ctg11
CAAA01184142
-
-
CAAA01184142.1
finished
6553 -        
  GAP (type-2) length 100 bps                  
101
mschrUn_ctg11
CAAA01092966
-
-
CAAA01092966.1
finished
1824 -        
  GAP (type-3) length unknown                  
103
mschrUn_ctg12
CAAA01149061
-
-
CAAA01149061.1
finished
1034 -        
  GAP (type-2) length 1578 bps                  
105
mschrUn_ctg12
CAAA01106144
-
-
CAAA01106144.1
finished
18284 -        
  GAP (type-2) length 1081 bps                  
107
mschrUn_ctg12
CAAA01106146
-
-
CAAA01106146.1
finished
2346 -        
  GAP (type-3) length unknown                  
109
mschrUn_ctg13
CAAA01204351
-
-
CAAA01204351.1
finished
7919 -        
  GAP (type-2) length 100 bps                  
111
mschrUn_ctg13
CAAA01200547
-
-
CAAA01200547.1
finished
14955 -        
  GAP (type-3) length unknown                  
113
mschrUn_ctg14
CAAA01117087
-
-
CAAA01117087.1
finished
2076 -        
  GAP (type-2) length 100 bps                  
115
mschrUn_ctg14
CAAA01117091
-
-
CAAA01117091.1
finished
2063 -        
  GAP (type-2) length 162 bps                  
117
mschrUn_ctg14
CAAA01181301
-
-
CAAA01181301.1
finished
17426 -        
  GAP (type-2) length 100 bps                  
119
mschrUn_ctg14
CAAA01211051
-
-
CAAA01211051.1
finished
9777 -        
  GAP (type-3) length unknown                  
121
mschrUn_ctg15
CAAA01199632
-
-
CAAA01199632.1
finished
7729 -        
  GAP (type-2) length 491 bps                  
123
mschrUn_ctg15
CAAA01134628
-
-
CAAA01134628.1
finished
3476 -        
  GAP (type-2) length 244 bps                  
125
mschrUn_ctg15
CAAA01208629
-
-
CAAA01208629.1
finished
9300 -        
  GAP (type-3) length unknown                  
127
mschrUn_ctg16
CAAA01210703
-
-
CAAA01210703.1
finished
8041 -        
  GAP (type-2) length 1015 bps                  
129
mschrUn_ctg16
CAAA01156884
-
-
CAAA01156884.1
finished
2878 -        
  GAP (type-2) length 100 bps                  
131
mschrUn_ctg16
CAAA01098150
-
-
CAAA01098150.1
finished
2208 -        
  GAP (type-2) length 1800 bps                  
133
mschrUn_ctg16
CAAA01131957
-
-
CAAA01131957.1
finished
5356 -        
  GAP (type-2) length 933 bps                  
135
mschrUn_ctg16
CAAA01214547
-
-
CAAA01214547.1
finished
3018 -        
  GAP (type-2) length 1399 bps                  
137
mschrUn_ctg16
CAAA01183943
-
-
CAAA01183943.1
finished
1916 -        
  GAP (type-3) length unknown                  
139
mschrUn_ctg17
CAAA01132901
-
-
CAAA01132901.1
finished
5937 -        
  GAP (type-2) length 1517 bps                  
141
mschrUn_ctg17
CAAA01096394
-
-
CAAA01096394.1
finished
1921 -        
  GAP (type-2) length 1536 bps                  
143
mschrUn_ctg17
CAAA01152989
-
-
CAAA01152989.1
finished
13774 -        
  GAP (type-3) length unknown                  
145
mschrUn_ctg18
CAAA01159653
-
-
CAAA01159653.1
finished
3615 -        
  GAP (type-2) length 100 bps                  
147
mschrUn_ctg18
CAAA01140686
-
-
CAAA01140686.1
finished
1848 -        
  GAP (type-2) length 100 bps                  
149
mschrUn_ctg18
CAAA01204303
-
-
CAAA01204303.1
finished
1413 -        
  GAP (type-2) length 1054 bps                  
151
mschrUn_ctg18
CAAA01106128
-
-
CAAA01106128.1
finished
2100 -        
  GAP (type-2) length 100 bps                  
153
mschrUn_ctg18
CAAA01106131
-
-
CAAA01106131.1
finished
3635 -        
  GAP (type-2) length 1659 bps                  
155
mschrUn_ctg18
CAAA01106134
-
-
CAAA01106134.1
finished
769 -        
  GAP (type-2) length 100 bps                  
157
mschrUn_ctg18
CAAA01106137
-
-
CAAA01106137.1
finished
1704 -        
  GAP (type-2) length 100 bps                  
159
mschrUn_ctg18
CAAA01153862
-
-
CAAA01153862.1
finished
1924 -        
  GAP (type-2) length 100 bps                  
161
mschrUn_ctg18
CAAA01184187
-
-
CAAA01184187.1
finished
5596 -        
  GAP (type-2) length 100 bps                  
163
mschrUn_ctg18
CAAA01106141
-
-
CAAA01106141.1
finished
2755 -        
  GAP (type-3) length unknown                  
165
mschrUn_ctg19
CAAA01120220
-
-
CAAA01120220.1
finished
2479 -        
  GAP (type-2) length 1357 bps                  
167
mschrUn_ctg19
CAAA01147314
-
-
CAAA01147314.1
finished
5570 -        
  GAP (type-2) length 1807 bps                  
169
mschrUn_ctg19
CAAA01170222
-
-
CAAA01170222.1
finished
8756 -        
  GAP (type-2) length 1389 bps                  
171
mschrUn_ctg19
CAAA01213144
-
-
CAAA01213144.1
finished
1929 -        
  GAP (type-2) length 1475 bps                  
173
mschrUn_ctg19
CAAA01120223
-
-
CAAA01120223.1
finished
2002 -        
  GAP (type-3) length unknown                  
175
mschrUn_ctg20
CAAA01098558
-
-
CAAA01098558.1
finished
34620 -        
  GAP (type-2) length 100 bps                  
177
mschrUn_ctg20
CAAA01134581
-
-
CAAA01134581.1
finished
7782 -        
  GAP (type-2) length 100 bps                  
179
mschrUn_ctg20
CAAA01124692
-
-
CAAA01124692.1
finished
2314 -        
  GAP (type-2) length 2105 bps                  
181
mschrUn_ctg20
CAAA01150704
-
-
CAAA01150704.1
finished
25364 -        
  GAP (type-3) length unknown                  
183
mschrUn_ctg21
CAAA01171143
-
-
CAAA01171143.1
finished
29468 -        
  GAP (type-2) length 1999 bps                  
185
mschrUn_ctg21
CAAA01111687
-
-
CAAA01111687.1
finished
8453 -        
  GAP (type-2) length 3375 bps                  
187
mschrUn_ctg21
CAAA01153724
-
-
CAAA01153724.1
finished
3778 -        
  GAP (type-3) length unknown                  
189
mschrUn_ctg22
CAAA01203092
-
-
CAAA01203092.1
finished
13940 -        
  GAP (type-2) length 319 bps                  
191
mschrUn_ctg22
CAAA01189579
-
-
CAAA01189579.1
finished
5949 -        
  GAP (type-3) length unknown                  
193 RP24-130G10
mschrUn_ctg23
bN130G10
-
-
AC149090.2
finished
114452 RPCI-24        
  GAP (type-3) length unknown                  
195 RP23-225M6
mschrUn_ctg24
bM225M6
-
-
AF441733.2
finished
31129 RPCI-23        

Statistics

Clone Summary

Number of gaps
97
Gap types
type-2
75
type-3
22
Total clones
98
Clone HTGS Phases
finished
98
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
772,613
Total finished length of fin clones w/o overlap
772,613
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
772,613
Total finished length of fin+unfin clones w/o overlap
772,613

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Other links

* quick link - http://q.sanger.ac.uk/0jhar2na