ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__SPRET_Ei__7 (TPF updated: 2014-07-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH35-17P24
Spretus_7ctg1
Cl/Pr f35A17P24/CH35_17P24 swap
EPN details
CT027994.2
finished
2 CH35-93K20
Spretus_7ctg1
Cl/Pr f35A93K20/CH35_93K20 swap
EPN details
CU302375.2
finished
3 CH35-333M4
Spretus_7ctg1
Cl/Pr f35A333M4/CH35_333M4 swap
EPN details
CU329702.1
finished
4 CH35-123K8
Spretus_7ctg1
Cl/Pr f35A123K8/CH35_123K8 swap
EPN details
CU074422.1
finished
5 CH35-243K2
Spretus_7ctg1
Cl/Pr f35A243K2/CH35_243K2 swap
EPN details
CU179677.2
finished
6 CH35-374F13
Spretus_7ctg1
Cl/Pr f35A374F13/CH35_374F13 swap
EPN details
CT967323.1
finished
7 CH35-76I5
Spretus_7ctg1
Cl/Pr f35A76I5/CH35_76I5 swap
EPN details
CT990573.1
finished
8 CH35-391C2
Spretus_7ctg1
Cl/Pr f35A391C2/CH35_391C2 swap
EPN details
CT963096.1
finished
9 CH35-35H19
Spretus_7ctg1
Cl/Pr f35A35H19/CH35_35H19 swap
EPN details
CT990572.1
finished
10 CH35-96O17
Spretus_7ctg1
Cl/Pr f35A96O17/CH35_96O17 swap
EPN details
CU468273.1
finished
11 CH35-359A6
Spretus_7ctg1
Cl/Pr f35A359A6/CH35_359A6 swap
EPN details
CT990560.2
finished

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH35-17P24
Spretus_7ctg1
Cl/Pr f35A17P24/CH35_17P24 swap
EPN details
Submitted to EMBL
07-FEB-06
CT027994.2
finished
169471 CH35 5' / 5'
1 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
2 CH35-93K20
Spretus_7ctg1
Cl/Pr f35A93K20/CH35_93K20 swap
EPN details
Analysed
20-DEC-06
CU302375.2
finished
73125 CH35 3' / 5'
73125 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
3 CH35-333M4
Spretus_7ctg1
Cl/Pr f35A333M4/CH35_333M4 swap
EPN details
Analysed
23-JAN-07
CU329702.1
finished
57140 CH35 3' / 5'
57140 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
4 CH35-123K8
Spretus_7ctg1
Cl/Pr f35A123K8/CH35_123K8 swap
EPN details
Analysed
17-AUG-06
CU074422.1
finished
195668 CH35 3' / 5'
195668 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
5 CH35-243K2
Spretus_7ctg1
Cl/Pr f35A243K2/CH35_243K2 swap
EPN details
Analysed
02-NOV-06
CU179677.2
finished
65984 CH35 3' / 5'
65984 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
6 CH35-374F13
Spretus_7ctg1
Cl/Pr f35A374F13/CH35_374F13 swap
EPN details
Analysed
03-JUN-06
CT967323.1
finished
196130 CH35 3' / 5'
196130 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
7 CH35-76I5
Spretus_7ctg1
Cl/Pr f35A76I5/CH35_76I5 swap
EPN details
Analysed
03-JUN-06
CT990573.1
finished
132096 CH35 3' / 5'
132096 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
8 CH35-391C2
Spretus_7ctg1
Cl/Pr f35A391C2/CH35_391C2 swap
EPN details
Analysed
09-MAY-06
CT963096.1
finished
164625 CH35 3' / 5'
164625 / 67203
- / -
67202
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
9 CH35-35H19
Spretus_7ctg1
Cl/Pr f35A35H19/CH35_35H19 swap
EPN details
Analysed
03-JUN-06
CT990572.1
finished
174594 CH35 3' / 5'
174594 / 2001
- / -
1972
3.55
Identified
2014-07-23
fetch_ncbi...
humpub
 
10 CH35-96O17
Spretus_7ctg1
Cl/Pr f35A96O17/CH35_96O17 swap
EPN details
Analysed
08-SEP-07
CU468273.1
finished
99645 CH35 3' / 5'
99645 / 2001
- / -
2000
0
Identified
2014-07-23
fetch_ncbi...
humpub
 
11 CH35-359A6
Spretus_7ctg1
Cl/Pr f35A359A6/CH35_359A6 swap
EPN details
Analysed
25-JUL-06
CT990560.2
finished
194774 CH35        

Statistics

Clone Summary

Number of gaps
0
Total clones
11
Clone HTGS Phases
finished
11
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
85,174
Total finished length of fin clones w/ overlap
1,523,252
Total finished length of fin clones w/o overlap
1,438,078
Total overlap length of fin+unfin clones
85,174
Total finished length of fin+unfin clones w/ overlap
1,523,252
Total finished length of fin+unfin clones w/o overlap
1,438,078

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Other links

* quick link - http://q.sanger.ac.uk/8b3wtjyh