ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__NOD_MrkTac__11 (TPF updated: 2014-10-23)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 DN-97M20
Mmchr11_NOD_IDD4_1
bQ97M20
EPN details
CR933541.6
finished
2 DN-490M13
Mmchr11_NOD_IDD4_1
bQ490M13
EPN details
CR936925.7
finished
3 DN-476D14
Mmchr11_NOD_IDD4_1
bQ476D14
EPN details
CR933542.3
finished
4 DN-160I24
Mmchr11_NOD_IDD4_1
bQ160I24
EPN details
CR933731.5
finished
5 DN-491F10
Mmchr11_NOD_IDD4_1
bQ491F10
EPN details
CR936841.11
finished
6 DN-183N8
Mmchr11_NOD_IDD4_1
bQ183N8
EPN details
CR933736.12
finished
7 DN-199E5
Mmchr11_NOD_IDD4_1
bQ199E5
EPN details
CR933735.5
finished
8 DN-279H6
Mmchr11_NOD_IDD4_1
bQ279H6
EPN details
CR936845.11
finished
9 DN-393H17
Mmchr11_NOD_IDD4_1
bQ393H17
EPN details
CR936847.6
finished
10 DN-72H10
Mmchr11_NOD_IDD4_1
bQ72H10
EPN details
CU424436.8
finished
11 DN-246G6
Mmchr11_NOD_IDD4_1
bQ246G6
EPN details
CR933817.15
finished
12 DN-418I23
Mmchr11_NOD_IDD4_2
bQ418I23
EPN details
CU210938.6
finished
13 DN-72L12
Mmchr11_NOD_IDD4_2
bQ72L12
EPN details
CU234134.7
finished
14 DN-254E8
Mmchr11_NOD_IDD4_2
bQ254E8
EPN details
CU210936.9
finished
15 DN-175I1
Mmchr11_NOD_IDD4_2
bQ175I1
EPN details
CU207323.5
finished
16 DN-143H6
Mmchr11_NOD_IDD4_2
bQ143H6
EPN details
CU210873.5
finished
17 DN-454L24
Mmchr11_NOD_IDD4_2
bQ454L24
EPN details
CU405929.2
finished
18 DN-41L15
Mmchr11_NOD_IDD4_2
bQ41L15
EPN details
CU207348.13
finished
19 DN-186G7
Mmchr11_NOD_IDD4_2
bQ186G7
EPN details
CU210950.8
finished
20 DN-24D21
Mmchr11_NOD_IDD4_2
bQ24D21
EPN details
CU207324.10
finished
21 DN-11O12
Mmchr11_NOD_IDD4_2
bQ11O12
EPN details
CU207341.13
finished
22 DN-193K17
Mmchr11_NOD_IDD4_2
bQ193K17
EPN details
CU406973.8
finished
23 DN-144H13
Mmchr11_NOD_IDD4_2
bQ144H13
EPN details
CU207308.6
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 176646 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933541.6 1 176646 +
176647 215559 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR936925.7 2001 40913 +
215560 261044 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933542.3 2001 47485 +
261045 472026 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933731.5 2001 212982 +
472027 584536 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR936841.11 2001 114510 +
584537 776766 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933736.12 2001 194230 +
776767 963646 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933735.5 2001 188880 +
963647 1063308 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR936845.11 2001 101662 +
1063309 1232115 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR936847.6 2001 170807 +
1232116 1333459 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU424436.8 2001 103344 +
1333460 1550185 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CR933817.15 1 216726 -
1550186 1709696 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU210938.6 1 159511 +
1709697 1826119 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU234134.7 2001 118423 +
1826120 1910987 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU210936.9 2001 86868 +
1910988 2094351 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU207323.5 2001 185364 +
2094352 2160547 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU210873.5 2001 68196 +
2160548 2205506 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU405929.2 2001 46959 +
2205507 2330180 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU207348.13 2001 126674 +
2330181 2391815 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU210950.8 2001 63635 +
2391816 2558447 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU207324.10 2001 168632 +
2558448 2711443 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU207341.13 2001 154996 +
2711444 2799050 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU406973.8 2001 89607 +
2799051 3012496 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 23 CU207308.6 2001 215446 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 DN-97M20
Mmchr11_NOD_IDD4_1
bQ97M20
EPN details
Submitted to EMBL
13-JAN-09
CR933541.6
finished
176646 DIL NOD 3' / 5'
176646 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
2 DN-490M13
Mmchr11_NOD_IDD4_1
bQ490M13
EPN details
Submitted to EMBL
13-JAN-09
CR936925.7
finished
40913 DIL NOD 3' / 5'
40913 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
3 DN-476D14
Mmchr11_NOD_IDD4_1
bQ476D14
EPN details
Submitted to EMBL
13-JAN-09
CR933542.3
finished
47485 DIL NOD 3' / 5'
47485 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
4 DN-160I24
Mmchr11_NOD_IDD4_1
bQ160I24
EPN details
Submitted to EMBL
13-JAN-09
CR933731.5
finished
212982 DIL NOD 3' / 5'
212982 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
5 DN-491F10
Mmchr11_NOD_IDD4_1
bQ491F10
EPN details
Submitted to EMBL
13-JAN-09
CR936841.11
finished
114510 DIL NOD 3' / 5'
114510 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
6 DN-183N8
Mmchr11_NOD_IDD4_1
bQ183N8
EPN details
Submitted to EMBL
13-JAN-09
CR933736.12
finished
194230 DIL NOD 3' / 5'
194230 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
7 DN-199E5
Mmchr11_NOD_IDD4_1
bQ199E5
EPN details
Submitted to EMBL
13-JAN-09
CR933735.5
finished
188880 DIL NOD 3' / 5'
188880 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
8 DN-279H6
Mmchr11_NOD_IDD4_1
bQ279H6
EPN details
Submitted to EMBL
13-JAN-09
CR936845.11
finished
101662 DIL NOD 3' / 5'
101662 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
9 DN-393H17
Mmchr11_NOD_IDD4_1
bQ393H17
EPN details
Submitted to EMBL
13-JAN-09
CR936847.6
finished
170807 DIL NOD 3' / 5'
170807 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
10 DN-72H10
Mmchr11_NOD_IDD4_1
bQ72H10
EPN details
Submitted to EMBL
13-JAN-09
CU424436.8
finished
103344 DIL NOD 3' / 3'
103344 / 216726
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
11 DN-246G6
Mmchr11_NOD_IDD4_1
bQ246G6
EPN details
Submitted to EMBL
13-JAN-09
CR933817.15
finished
218726 DIL NOD 5' / 5'
1 / 1
- / -
0
0
Identified
2011-07-28
agp2oracle
jt8
 
12 DN-418I23
Mmchr11_NOD_IDD4_2
bQ418I23
EPN details
Submitted to EMBL
13-JAN-09
CU210938.6
finished
159511 DIL NOD 3' / 5'
159511 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
13 DN-72L12
Mmchr11_NOD_IDD4_2
bQ72L12
EPN details
Submitted to EMBL
13-JAN-09
CU234134.7
finished
118423 DIL NOD 3' / 5'
118423 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
14 DN-254E8
Mmchr11_NOD_IDD4_2
bQ254E8
EPN details
Submitted to EMBL
13-JAN-09
CU210936.9
finished
86868 DIL NOD 3' / 5'
86868 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
15 DN-175I1
Mmchr11_NOD_IDD4_2
bQ175I1
EPN details
Submitted to EMBL
13-JAN-09
CU207323.5
finished
185364 DIL NOD 3' / 5'
185364 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
16 DN-143H6
Mmchr11_NOD_IDD4_2
bQ143H6
EPN details
Submitted to EMBL
13-JAN-09
CU210873.5
finished
68196 DIL NOD 3' / 5'
68196 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
17 DN-454L24
Mmchr11_NOD_IDD4_2
bQ454L24
EPN details
Submitted to EMBL
13-JAN-09
CU405929.2
finished
46959 DIL NOD 3' / 5'
46959 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
18 DN-41L15
Mmchr11_NOD_IDD4_2
bQ41L15
EPN details
Submitted to EMBL
13-JAN-09
CU207348.13
finished
126674 DIL NOD 3' / 5'
126674 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
19 DN-186G7
Mmchr11_NOD_IDD4_2
bQ186G7
EPN details
Submitted to EMBL
13-JAN-09
CU210950.8
finished
63635 DIL NOD 3' / 5'
63635 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
20 DN-24D21
Mmchr11_NOD_IDD4_2
bQ24D21
EPN details
Submitted to EMBL
13-JAN-09
CU207324.10
finished
168632 DIL NOD 3' / 5'
168632 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
21 DN-11O12
Mmchr11_NOD_IDD4_2
bQ11O12
EPN details
Submitted to EMBL
13-JAN-09
CU207341.13
finished
154996 DIL NOD 3' / 5'
154996 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
22 DN-193K17
Mmchr11_NOD_IDD4_2
bQ193K17
EPN details
Submitted to EMBL
13-JAN-09
CU406973.8
finished
89607 DIL NOD 3' / 5'
89607 / 2001
- / -
2000
0
Identified
2014-10-23
fetch_ncbi...
humpub
 
23 DN-144H13
Mmchr11_NOD_IDD4_2
bQ144H13
EPN details
Submitted to EMBL
13-JAN-09
CU207308.6
finished
215446 DIL NOD        

Statistics

Clone Summary

Number of gaps
0
Total clones
23
Clone HTGS Phases
finished
23
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
42,000
Total finished length of fin clones w/ overlap
3,054,496
Total finished length of fin clones w/o overlap
3,012,496
Total overlap length of fin+unfin clones
42,000
Total finished length of fin+unfin clones w/ overlap
3,054,496
Total finished length of fin+unfin clones w/o overlap
3,012,496

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Other links

* quick link - http://q.sanger.ac.uk/bxn1l0vh