ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__129X1_SvJ__1 (TPF updated: 2014-08-30)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 423C02
129X1/SvJ_Mmchr1_ctg1
423C02
AC008100.71
finished
  GAP (type-3) length unknown    
3 68E20
129X1/SvJ_Mmchr1_ctg2
68E20
AC005992.15
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 220020 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 1 AC008100.71 1 220020 +
220021 270020 2 N 50000 contig no
270021 424304 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 3 - 3 AC005992.15 1 154284 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 423C02
129X1/SvJ_Mmchr1_ctg1
423C02
-
-
AC008100.71
finished
220020 -        
  GAP (type-3) length unknown                  
3 68E20
129X1/SvJ_Mmchr1_ctg2
68E20
-
-
AC005992.15
finished
154284 -        

Statistics

Clone Summary

Number of gaps
1
Gap types
type-3
1
Total clones
2
Clone HTGS Phases
finished
2
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
0
Total finished length of fin clones w/ overlap
374,304
Total finished length of fin clones w/o overlap
374,304
Total overlap length of fin+unfin clones
0
Total finished length of fin+unfin clones w/ overlap
374,304
Total finished length of fin+unfin clones w/o overlap
374,304

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Other links

* quick link - http://q.sanger.ac.uk/67f41rp8