ChromoView - clone / Assembly sequencing status

Mouse: Sub region GRC__MOUSE__129S1_SvImJ__14 (TPF updated: 2014-12-20)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008683.1
finished
2 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008684.1
finished
3 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008685.1
finished
4 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008686.1
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 404892 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AE008683.1 1 404892 +
404893 804791 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AE008684.1 201 400099 +
804792 1204690 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AE008685.1 201 400099 +
1204691 1666365 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 AE008686.1 201 461875 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
-
-
AE008683.1
finished
404892 - 3' / 5'
404892 / 201
- / -
200
0
Identified
2014-11-12
fetch_ncbi...
humpub
 
2 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
-
-
AE008684.1
finished
400099 - 3' / 5'
400099 / 201
- / -
200
0
Identified
2014-11-12
fetch_ncbi...
humpub
 
3 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
-
-
AE008685.1
finished
400099 - 3' / 5'
400099 / 201
- / -
200
0
Identified
2014-11-12
fetch_ncbi...
humpub
 
4 Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
-
-
AE008686.1
finished
461875 -        

Statistics

Clone Summary

Number of gaps
0
Total clones
4
Clone HTGS Phases
finished
4
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
600
Total finished length of fin clones w/ overlap
1,666,965
Total finished length of fin clones w/o overlap
1,666,365
Total overlap length of fin+unfin clones
600
Total finished length of fin+unfin clones w/ overlap
1,666,965
Total finished length of fin+unfin clones w/o overlap
1,666,365

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Other links

* quick link - http://q.sanger.ac.uk/i4p0x5p7