ChromoView - clone / Assembly sequencing status
Mouse: Sub region GRC__MOUSE__129S1_SvImJ__14 (TPF updated: 2018-01-16) TPF
#
Clone ext/Contig
Clone int
Acc/Fin
1
Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008683.1
finished
2
Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008684.1
finished
3
Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008685.1
finished
4
Multiple
129S1/SvImJ_Mmchr14_ctg3
Multiple
AE008686.1
finished
AGP
AGP_S
AGP_E
Rank
Status
Acc.ver
Clone_S
Clone_E
Str
1
404892
1
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4
AE008683.1
1
404892
+
404893
804791
2
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4
AE008684.1
201
400099
+
804792
1204690
3
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4
AE008685.1
201
400099
+
1204691
1666365
4
FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4
AE008686.1
201
461875
+
Details
Component Sanger::HumPub::ChromoView failed to execute
Statistics
Clone Summary
- Number of gaps
- 0
- Total clones
- 4
- Clone HTGS Phases
- finished
- 4
- Number of clones w/o accession
- 0
Overlap Summary
- Total overlap length of fin clones
- 600
- Total finished length of fin clones w/ overlap
- 1,666,965
- Total finished length of fin clones w/o overlap
- 1,666,365
- Total overlap length of fin+unfin clones
- 600
- Total finished length of fin+unfin clones w/ overlap
- 1,666,965
- Total finished length of fin+unfin clones w/o overlap
- 1,666,365
TPF
# | Clone ext/Contig | Clone int | Acc/Fin |
---|---|---|---|
1 | Multiple 129S1/SvImJ_Mmchr14_ctg3 |
Multiple |
AE008683.1 finished |
2 | Multiple 129S1/SvImJ_Mmchr14_ctg3 |
Multiple |
AE008684.1 finished |
3 | Multiple 129S1/SvImJ_Mmchr14_ctg3 |
Multiple |
AE008685.1 finished |
4 | Multiple 129S1/SvImJ_Mmchr14_ctg3 |
Multiple |
AE008686.1 finished |
AGP
AGP_S | AGP_E | Rank | Status | Acc.ver | Clone_S | Clone_E | Str |
---|---|---|---|---|---|---|---|
1 | 404892 | 1 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 | AE008683.1 | 1 | 404892 | + |
404893 | 804791 | 2 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 | AE008684.1 | 201 | 400099 | + |
804792 | 1204690 | 3 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 | AE008685.1 | 201 | 400099 | + |
1204691 | 1666365 | 4 | FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 4 | AE008686.1 | 201 | 461875 | + |
Details
Component Sanger::HumPub::ChromoView failed to execute
Statistics
Clone Summary
- Number of gaps
- 0
- Total clones
- 4
- Clone HTGS Phases
- finished
- 4
- Number of clones w/o accession
- 0
Overlap Summary
- Total overlap length of fin clones
- 600
- Total finished length of fin clones w/ overlap
- 1,666,965
- Total finished length of fin clones w/o overlap
- 1,666,365
- Total overlap length of fin+unfin clones
- 600
- Total finished length of fin+unfin clones w/ overlap
- 1,666,965
- Total finished length of fin+unfin clones w/o overlap
- 1,666,365
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Other links
- Clones in Multiple TPFs
- Problems with ChromoView?
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