ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_7__6 (TPF updated: 2014-10-21)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP11-60E24
Hschr6_MHC_SSTO_ctg1
bA60E24
EPN details
AL390196.17
finished
2 DASS-179P20
Hschr6_MHC_SSTO_ctg1
bSS179P20
EPN details
BX088523.6
finished
3 DASS-263B11
Hschr6_MHC_SSTO_ctg1
bSS263B11
EPN details
BX470194.8
finished
4 DASS-46L4
Hschr6_MHC_SSTO_ctg1
bSS46L4
EPN details
BX119924.8
finished
5 DASS-125F11
Hschr6_MHC_SSTO_ctg1
bSS125F11
EPN details
BX005144.14
finished
6 DASS-381E5
Hschr6_MHC_SSTO_ctg1
bSS381E5
EPN details
BX248109.8
finished
7 DASS-159D11
Hschr6_MHC_SSTO_ctg1
bSS159D11
EPN details
BX293545.10
finished
8 DASS-263D3
Hschr6_MHC_SSTO_ctg1
bSS263D3
EPN details
BX248413.5
finished
9 DASS-357K17
Hschr6_MHC_SSTO_ctg1
bSS357K17
EPN details
BX248093.4
finished
10 DASS-5D2
Hschr6_MHC_SSTO_ctg1
bSS5D2
EPN details
BX248084.5
finished
11 DASS-352F1
Hschr6_MHC_SSTO_ctg1
bSS352F1
EPN details
BX005432.7
finished
12 DASS-103C7
Hschr6_MHC_SSTO_ctg1
bSS103C7
EPN details
BX005133.4
finished
13 DASS-235A23
Hschr6_MHC_SSTO_ctg1
bSS235A23
EPN details
BX248400.3
finished
14 DASS-372E1
Hschr6_MHC_SSTO_ctg1
bSS372E1
EPN details
BX247947.4
finished
  GAP (type-2) length 79442 bps    
16 DASS-219N15
Hschr6_MHC_SSTO_ctg1
bSS219N15
EPN details
BX120002.12
finished
17 DASS-38I7
Hschr6_MHC_SSTO_ctg1
bSS38I7
EPN details
BX005428.7
finished
18 DASS-366B6
Hschr6_MHC_SSTO_ctg1
bSS366B6
EPN details
BX247949.9
finished
19 DASS-385P13
Hschr6_MHC_SSTO_ctg1
bSS385P13
EPN details
BX284699.4
finished
20 DASS-101N5
Hschr6_MHC_SSTO_ctg1
bSS101N5
EPN details
BX005091.7
finished
21 DASS-211F20
Hschr6_MHC_SSTO_ctg1
bSS211F20
EPN details
BX120004.8
finished
22 DASS-90B3
Hschr6_MHC_SSTO_ctg1
bSS90B3
EPN details
BX088647.3
finished
23 BSS90B3_59H21
Hschr6_MHC_SSTO_ctg1
Cl/Pr BSS90B3_59H21/bSS90B3_59H21 swap
EPN details
BX897730.1
finished
24 DASS-59H21
Hschr6_MHC_SSTO_ctg1
bSS59H21
EPN details
BX005441.10
finished
25 DASS-254G14
Hschr6_MHC_SSTO_ctg1
bSS254G14
EPN details
BX248419.4
finished
26 DASS-179M10
Hschr6_MHC_SSTO_ctg1
bSS179M10
EPN details
BX248580.4
finished
27 DASS-161J15
Hschr6_MHC_SSTO_ctg1
bSS161J15
EPN details
BX294158.7
finished
  GAP (type-2) length 16691 bps    
29 DASS-94P17A
Hschr6_MHC_SSTO_ctg1
Cl/Pr bSS94P17A/bSS94P17 swap
EPN details
CR751549.1
finished
30 DASS-377E3
Hschr6_MHC_SSTO_ctg1
bSS377E3
EPN details
BX936375.4
finished
31 DASS-205I8
Hschr6_MHC_SSTO_ctg1
bSS205I8
EPN details
BX936369.5
finished
32 DASS-205E5
Hschr6_MHC_SSTO_ctg1
bSS205E5
EPN details
BX248096.10
finished
33 DASS-94P17B
Hschr6_MHC_SSTO_ctg1
Cl/Pr bSS94P17B/bSS94P17 swap
EPN details
CR751550.1
finished
  GAP (type-2) length 2260 bps    
35 DASS-249B18
Hschr6_MHC_SSTO_ctg1
bSS249B18
EPN details
BX248518.5
finished
36 DASS-182C6
Hschr6_MHC_SSTO_ctg1
bSS182C6
EPN details
BX119957.13
finished
  GAP (type-2) length 14263 bps    
38 DASS-191K16
Hschr6_MHC_SSTO_ctg1
bSS191K16
EPN details
BX248307.7
finished
  GAP (type-2) length 34680 bps    
40 DASS-236I5
Hschr6_MHC_SSTO_ctg1
bSS236I5
EPN details
BX914213.4
finished
  GAP (type-2) length 12401 bps    
42 DASS-335H18
Hschr6_MHC_SSTO_ctg1
bSS335H18
EPN details
BX571801.6
finished
  GAP (type-2) length 164527 bps    
44 DASS-278P8
Hschr6_MHC_SSTO_ctg1
bSS278P8
EPN details
BX936457.5
finished
45 DASS-298E13
Hschr6_MHC_SSTO_ctg1
bSS298E13
EPN details
BX942838.5
finished
46 DASS-206K16
Hschr6_MHC_SSTO_ctg1
bSS206K16
EPN details
BX248321.5
finished
47 DASS-357P10
Hschr6_MHC_SSTO_ctg1
bSS357P10
EPN details
BX247900.8
finished
  GAP (type-2) length 49946 bps    
49 DASS-209N9
Hschr6_MHC_SSTO_ctg1
bSS209N9
EPN details
BX088580.11
finished
50 DASS-343G16
Hschr6_MHC_SSTO_ctg1
bSS343G16
EPN details
BX470206.6
finished
51 DASS-311G1
Hschr6_MHC_SSTO_ctg1
bSS311G1
EPN details
BX248310.3
finished
52 DASS-38L18
Hschr6_MHC_SSTO_ctg1
bSS38L18
EPN details
BX119958.10
finished
53 DASS-81K16
Hschr6_MHC_SSTO_ctg1
bSS81K16
EPN details
BX005439.8
finished
54 DASS-370L18
Hschr6_MHC_SSTO_ctg1
bSS370L18
EPN details
BX682535.3
finished
55 DASS-161H22
Hschr6_MHC_SSTO_ctg1
bSS161H22
EPN details
BX248516.6
finished
56 DASS-280D8
Hschr6_MHC_SSTO_ctg1
bSS280D8
EPN details
BX248519.7
finished
57 DASS-82G15
Hschr6_MHC_SSTO_ctg1
bSS82G15
EPN details
BX248305.13
finished
58 DASS-336N12
Hschr6_MHC_SSTO_ctg1
bSS336N12
EPN details
BX511262.7
finished
59 DASS-312M4
Hschr6_MHC_SSTO_ctg1
bSS312M4
EPN details
BX248244.7
finished
  GAP (type-2) length 14782 bps    
61 DASS-324O23
Hschr6_MHC_SSTO_ctg1
bSS324O23
EPN details
BX248133.10
finished
  GAP (type-2) length 61131 bps    
63 DASS-36P22
Hschr6_MHC_SSTO_ctg1
bSS36P22
EPN details
BX005460.8
finished
  GAP (type-2) length 23170 bps    
65 DASS-107J21
Hschr6_MHC_SSTO_ctg1
bSS107J21
EPN details
BX005143.8
finished
66 DASS-264H16
Hschr6_MHC_SSTO_ctg1
bSS264H16
EPN details
CR753822.3
finished
67 DASS-307J8
Hschr6_MHC_SSTO_ctg1
bSS307J8
EPN details
BX679671.7
finished
  GAP (type-2) length 77056 bps    
69 DASS-39F23
Hschr6_MHC_SSTO_ctg1
bSS39F23
EPN details
BX284686.9
finished
70 DASS-105C4
Hschr6_MHC_SSTO_ctg1
bSS105C4
EPN details
BX284927.5
finished
71 DASS-392K21
Hschr6_MHC_SSTO_ctg1
bSS392K21
EPN details
BX119999.11
finished
72 DASS-380D18
Hschr6_MHC_SSTO_ctg1
bSS380D18
EPN details
BX255945.6
finished
73 DASS-397D15
Hschr6_MHC_SSTO_ctg1
bSS397D15
EPN details
BX120007.9
finished
74 DASS-218M11
Hschr6_MHC_SSTO_ctg1
bSS218M11
EPN details
BX571807.5
finished
75 DASS-23B5
Hschr6_MHC_SSTO_ctg1
bSS23B5
EPN details
BX649210.7
finished
76 DASS-233C19
Hschr6_MHC_SSTO_ctg1
bSS233C19
EPN details
BX296568.4
finished
77 DASS-390M22
Hschr6_MHC_SSTO_ctg1
bSS390M22
EPN details
BX248406.4
finished
78 BSS390M22_256O6
Hschr6_MHC_SSTO_ctg1
Cl/Pr BSS390M22_256O6/bSS390M22_256O6 swap
EPN details
BX927131.1
finished
79 DASS-256O6
Hschr6_MHC_SSTO_ctg1
bSS256O6
EPN details
BX296564.7
finished
80 DASS-193J13
Hschr6_MHC_SSTO_ctg1
bSS193J13
EPN details
BX682530.4
finished
81 DASS-67H14
Hschr6_MHC_SSTO_ctg1
bSS67H14
EPN details
BX088556.11
finished
82 DASS-219C23
Hschr6_MHC_SSTO_ctg1
bSS219C23
EPN details
BX664702.5
finished
  GAP (type-2) length 50000 bps    
84 DASS-32K24
Hschr6_MHC_SSTO_ctg1
bSS32K24
EPN details
BX005422.5
finished
85 DASS-227B13
Hschr6_MHC_SSTO_ctg1
bSS227B13
EPN details
BX120009.10
finished
  GAP (type-2) length 29808 bps    
87 DASS-241N2
Hschr6_MHC_SSTO_ctg1
bSS241N2
EPN details
BX248309.8
finished
  GAP (type-2) length 21750 bps    
89 DASS-63A3
Hschr6_MHC_SSTO_ctg1
bSS63A3
EPN details
BX248408.4
finished
  GAP (type-2) length 50858 bps    
91 DASS-254C22
Hschr6_MHC_SSTO_ctg1
bSS254C22
EPN details
BX571808.6
finished
  GAP (type-2) length 52251 bps    
93 DASS-97D12
Hschr6_MHC_SSTO_ctg1
bSS97D12
EPN details
BX088650.9
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 13384 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 AL390196.17 1 13384 +
13385 100981 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX088523.6 1 87597 +
100982 142814 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX470194.8 2001 43833 +
142815 232872 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX119924.8 2001 92058 +
232873 249958 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX005144.14 2001 19086 +
249959 300569 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX248109.8 2001 52611 +
300570 322862 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX293545.10 2000 24292 +
322863 396704 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX248413.5 2001 75842 +
396705 506337 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX248093.4 2001 111633 +
506338 570405 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX248084.5 2001 66068 +
570406 625049 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX005432.7 2001 56644 +
625050 719258 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX005133.4 2001 96209 +
719259 752541 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX248400.3 2001 35283 +
752542 862602 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 14 BX247947.4 2001 112061 +
862603 942044 15 N 79442 contig yes # ALIGN GENUS
942045 993286 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX120002.12 1 51242 +
993287 1122220 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX005428.7 2001 130934 +
1122221 1176790 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX247949.9 2001 56570 +
1176791 1213898 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX284699.4 2001 39108 +
1213899 1304563 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX005091.7 2001 92665 +
1304564 1307399 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX120004.8 2001 4836 +
1307400 1405582 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX088647.3 2001 100183 +
1405583 1408811 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX897730.1 101 3329 +
1408812 1465975 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX005441.10 101 57264 +
1465976 1586296 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX248419.4 2001 122321 +
1586297 1641466 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX248580.4 2001 57170 +
1641467 1728519 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 16 - 27 BX294158.7 2001 89053 +
1728520 1745210 28 N 16691 contig yes # ALIGN GENUS
1745211 1751864 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 33 CR751549.1 1 6654 +
1751865 1785112 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 33 BX936375.4 2001 35248 +
1785113 1807867 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 33 BX936369.5 2001 24755 +
1807868 1829348 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 33 BX248096.10 2001 23481 +
1829349 1837434 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 33 CR751550.1 2001 10086 +
1837435 1839694 34 N 2260 contig yes # ALIGN GENUS
1839695 1874245 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 36 BX248518.5 1 34551 +
1874246 1984363 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 36 BX119957.13 2001 112118 +
1984364 1998626 37 N 14263 contig yes # ALIGN GENUS
1998627 2053537 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 38 BX248307.7 1 54911 +
2053538 2088217 39 N 34680 contig yes # ALIGN GENUS
2088218 2102276 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 40 - 40 BX914213.4 1 14059 +
2102277 2114677 41 N 12401 contig yes # ALIGN GENUS
2114678 2139293 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 42 BX571801.6 1 24616 +
2139294 2303820 43 N 164527 contig yes # ALIGN GENUS
2303821 2306956 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 BX936457.5 1 3136 +
2306957 2311311 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 BX942838.5 2001 6355 +
2311312 2338428 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 BX248321.5 2001 29117 +
2338429 2412049 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 BX247900.8 2001 75621 +
2412050 2461995 48 N 49946 contig yes # ALIGN GENUS
2461996 2510449 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX088580.11 1 48454 +
2510450 2567295 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX470206.6 2001 58846 +
2567296 2681615 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX248310.3 2001 116320 +
2681616 2718207 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX119958.10 2001 38592 +
2718208 2826208 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX005439.8 2001 110001 +
2826209 2828548 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX682535.3 2001 4340 +
2828549 2868986 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX248516.6 2001 42438 +
2868987 2907146 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX248519.7 2001 40160 +
2907147 2921831 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX248305.13 2001 16685 +
2921832 2988840 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX511262.7 2001 69009 +
2988841 3040986 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 59 BX248244.7 2001 54146 +
3040987 3055768 60 N 14782 contig yes # ALIGN GENUS
3055769 3094370 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 61 - 61 BX248133.10 1 38602 +
3094371 3155501 62 N 61131 contig yes # ALIGN GENUS
3155502 3191998 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 63 BX005460.8 1 36497 +
3191999 3215168 64 N 23170 contig yes # ALIGN GENUS
3215169 3267010 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 BX005143.8 1 51842 +
3267011 3275398 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 CR753822.3 2001 10388 +
3275399 3369733 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 67 BX679671.7 2001 96335 +
3369734 3446789 68 N 77056 contig yes # ALIGN GENUS
3446790 3526852 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX284686.9 1 80063 +
3526853 3633612 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX284927.5 2001 108760 +
3633613 3659378 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX119999.11 272 26037 +
3659379 3753438 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX255945.6 2001 96060 +
3753439 3861120 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX120007.9 2001 109682 +
3861121 3927805 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX571807.5 2001 68685 +
3927806 3936938 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX649210.7 2001 11133 +
3936939 4022675 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX296568.4 2002 87738 +
4022676 4145462 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX248406.4 2001 124787 +
4145463 4147883 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX927131.1 101 2521 +
4147884 4222629 79 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX296564.7 101 74846 +
4222630 4240565 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX682530.4 2001 19936 +
4240566 4353141 81 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX088556.11 2001 114576 +
4353142 4371366 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 82 BX664702.5 2001 20225 +
4371367 4421366 83 N 50000 contig yes # ALIGN GENUS
4421367 4518832 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 84 - 85 BX005422.5 1 97466 +
4518833 4581212 85 FClick to retrieve finished assembled sequence in green bar: rank(s) 84 - 85 BX120009.10 2001 64380 +
4581213 4611020 86 N 29808 contig yes # ALIGN GENUS
4611021 4640608 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 87 - 87 BX248309.8 1 29588 +
4640609 4662358 88 N 21750 contig yes # ALIGN GENUS
4662359 4724311 89 FClick to retrieve finished assembled sequence in green bar: rank(s) 89 - 89 BX248408.4 1 61953 +
4724312 4775169 90 N 50858 contig yes # ALIGN GENUS
4775170 4784600 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 91 - 91 BX571808.6 1 9431 +
4784601 4836851 92 N 52251 contig yes # ALIGN GENUS
4836852 4929369 93 FClick to retrieve finished assembled sequence in green bar: rank(s) 93 - 93 BX088650.9 1 92518 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP11-60E24
Hschr6_MHC_SSTO_ctg1
bA60E24
EPN details
Submitted to EMBL
12-JAN-09
AL390196.17
finished
43042 RPCI-11.1 3' / 5'
13384 / 1
- / -
29636
2.95
Identified
2014-10-21
fetch_ncbi...
humpub
Certificate approved
2 DASS-179P20
Hschr6_MHC_SSTO_ctg1
bSS179P20
EPN details
Submitted to EMBL
12-JAN-09
BX088523.6
finished
87597 DNA-arts-BAC.1-SSTO.1 3' / 5'
87597 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
3 DASS-263B11
Hschr6_MHC_SSTO_ctg1
bSS263B11
EPN details
Submitted to EMBL
12-JAN-09
BX470194.8
finished
43833 DNA-arts-BAC.1-SSTO.1 3' / 5'
43833 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
4 DASS-46L4
Hschr6_MHC_SSTO_ctg1
bSS46L4
EPN details
Submitted to EMBL
12-JAN-09
BX119924.8
finished
92058 DNA-arts-BAC.1-SSTO.1 3' / 5'
92058 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
5 DASS-125F11
Hschr6_MHC_SSTO_ctg1
bSS125F11
EPN details
Submitted to EMBL
12-JAN-09
BX005144.14
finished
19086 DNA-arts-BAC.1-SSTO.1 3' / 5'
19086 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
6 DASS-381E5
Hschr6_MHC_SSTO_ctg1
bSS381E5
EPN details
Submitted to EMBL
12-JAN-09
BX248109.8
finished
52611 DNA-arts-BAC.1-SSTO.1 3' / 5'
52611 / 2000
- / -
1999
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
7 DASS-159D11
Hschr6_MHC_SSTO_ctg1
bSS159D11
EPN details
Submitted to EMBL
12-JAN-09
BX293545.10
finished
24292 DNA-arts-BAC.1-SSTO.1 3' / 5'
24292 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
8 DASS-263D3
Hschr6_MHC_SSTO_ctg1
bSS263D3
EPN details
Submitted to EMBL
12-JAN-09
BX248413.5
finished
75842 DNA-arts-BAC.1-SSTO.1 3' / 5'
75842 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
9 DASS-357K17
Hschr6_MHC_SSTO_ctg1
bSS357K17
EPN details
Submitted to EMBL
12-JAN-09
BX248093.4
finished
111633 DNA-arts-BAC.1-SSTO.1 3' / 5'
111633 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
10 DASS-5D2
Hschr6_MHC_SSTO_ctg1
bSS5D2
EPN details
Submitted to EMBL
12-JAN-09
BX248084.5
finished
66068 DNA-arts-BAC.1-SSTO.1 3' / 5'
66068 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
11 DASS-352F1
Hschr6_MHC_SSTO_ctg1
bSS352F1
EPN details
Submitted to EMBL
12-JAN-09
BX005432.7
finished
56644 DNA-arts-BAC.1-SSTO.1 3' / 5'
56644 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
12 DASS-103C7
Hschr6_MHC_SSTO_ctg1
bSS103C7
EPN details
Submitted to EMBL
12-JAN-09
BX005133.4
finished
96209 DNA-arts-BAC.1-SSTO.1 3' / 5'
96209 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
13 DASS-235A23
Hschr6_MHC_SSTO_ctg1
bSS235A23
EPN details
Submitted to EMBL
12-JAN-09
BX248400.3
finished
35283 DNA-arts-BAC.1-SSTO.1 3' / 5'
35283 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
14 DASS-372E1
Hschr6_MHC_SSTO_ctg1
bSS372E1
EPN details
Submitted to EMBL
12-JAN-09
BX247947.4
finished
112061 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 79442 bps                  
16 DASS-219N15
Hschr6_MHC_SSTO_ctg1
bSS219N15
EPN details
Submitted to EMBL
12-JAN-09
BX120002.12
finished
51242 DNA-arts-BAC.1-SSTO.1 3' / 5'
51242 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
17 DASS-38I7
Hschr6_MHC_SSTO_ctg1
bSS38I7
EPN details
Submitted to EMBL
12-JAN-09
BX005428.7
finished
130934 DNA-arts-BAC.1-SSTO.1 3' / 5'
130934 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
18 DASS-366B6
Hschr6_MHC_SSTO_ctg1
bSS366B6
EPN details
Submitted to EMBL
12-JAN-09
BX247949.9
finished
56570 DNA-arts-BAC.1-SSTO.1 3' / 5'
56570 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
19 DASS-385P13
Hschr6_MHC_SSTO_ctg1
bSS385P13
EPN details
Submitted to EMBL
12-JAN-09
BX284699.4
finished
39108 DNA-arts-BAC.1-SSTO.1 3' / 5'
39108 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
20 DASS-101N5
Hschr6_MHC_SSTO_ctg1
bSS101N5
EPN details
Submitted to EMBL
12-JAN-09
BX005091.7
finished
92665 DNA-arts-BAC.1-SSTO.1 3' / 5'
92665 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
21 DASS-211F20
Hschr6_MHC_SSTO_ctg1
bSS211F20
EPN details
Submitted to EMBL
12-JAN-09
BX120004.8
finished
4836 DNA-arts-BAC.1-SSTO.1 3' / 5'
4836 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
22 DASS-90B3
Hschr6_MHC_SSTO_ctg1
bSS90B3
EPN details
Submitted to EMBL
12-JAN-09
BX088647.3
finished
100183 DNA-arts-BAC.1-SSTO.1 3' / 5'
100183 / 101
- / -
100
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
23 BSS90B3_59H21
Hschr6_MHC_SSTO_ctg1
Cl/Pr BSS90B3_59H21/bSS90B3_59H21 swap
EPN details
Submitted to EMBL
12-JAN-09
BX897730.1
finished
3329 - 3' / 5'
3329 / 101
- / -
100
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
24 DASS-59H21
Hschr6_MHC_SSTO_ctg1
bSS59H21
EPN details
Submitted to EMBL
12-JAN-09
BX005441.10
finished
57264 DNA-arts-BAC.1-SSTO.1 3' / 5'
57264 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
25 DASS-254G14
Hschr6_MHC_SSTO_ctg1
bSS254G14
EPN details
Submitted to EMBL
12-JAN-09
BX248419.4
finished
122321 DNA-arts-BAC.1-SSTO.1 3' / 5'
122321 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
26 DASS-179M10
Hschr6_MHC_SSTO_ctg1
bSS179M10
EPN details
Submitted to EMBL
12-JAN-09
BX248580.4
finished
57170 DNA-arts-BAC.1-SSTO.1 3' / 5'
57170 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
27 DASS-161J15
Hschr6_MHC_SSTO_ctg1
bSS161J15
EPN details
Submitted to EMBL
12-JAN-09
BX294158.7
finished
89053 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 16691 bps                  
29 DASS-94P17A
Hschr6_MHC_SSTO_ctg1
Cl/Pr bSS94P17A/bSS94P17 swap
EPN details
Submitted to EMBL
12-JAN-09
CR751549.1
finished
6654 DNA-arts-BAC.1-SSTO.1 3' / 5'
6654 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
30 DASS-377E3
Hschr6_MHC_SSTO_ctg1
bSS377E3
EPN details
Submitted to EMBL
06-MAY-08
BX936375.4
finished
35248 DNA-arts-BAC.1-SSTO.1 3' / 5'
35248 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
31 DASS-205I8
Hschr6_MHC_SSTO_ctg1
bSS205I8
EPN details
Submitted to EMBL
07-MAY-08
BX936369.5
finished
24755 DNA-arts-BAC.1-SSTO.1 3' / 5'
24755 / 2001
- / -
2000
0.4
Identified
2014-10-21
fetch_ncbi...
humpub
 
32 DASS-205E5
Hschr6_MHC_SSTO_ctg1
bSS205E5
EPN details
Submitted to EMBL
12-JAN-09
BX248096.10
finished
23481 DNA-arts-BAC.1-SSTO.1 3' / 5'
23481 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
33 DASS-94P17B
Hschr6_MHC_SSTO_ctg1
Cl/Pr bSS94P17B/bSS94P17 swap
EPN details
Submitted to EMBL
12-JAN-09
CR751550.1
finished
10086 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 2260 bps                  
35 DASS-249B18
Hschr6_MHC_SSTO_ctg1
bSS249B18
EPN details
Submitted to EMBL
12-JAN-09
BX248518.5
finished
34551 DNA-arts-BAC.1-SSTO.1 3' / 5'
34551 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
36 DASS-182C6
Hschr6_MHC_SSTO_ctg1
bSS182C6
EPN details
Submitted to EMBL
12-JAN-09
BX119957.13
finished
112118 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 14263 bps                  
38 DASS-191K16
Hschr6_MHC_SSTO_ctg1
bSS191K16
EPN details
Submitted to EMBL
12-JAN-09
BX248307.7
finished
54911 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 34680 bps                  
40 DASS-236I5
Hschr6_MHC_SSTO_ctg1
bSS236I5
EPN details
Submitted to EMBL
07-MAY-08
BX914213.4
finished
14059 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 12401 bps                  
42 DASS-335H18
Hschr6_MHC_SSTO_ctg1
bSS335H18
EPN details
Submitted to EMBL
12-JAN-09
BX571801.6
finished
24616 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 164527 bps                  
44 DASS-278P8
Hschr6_MHC_SSTO_ctg1
bSS278P8
EPN details
Submitted to EMBL
12-JAN-09
BX936457.5
finished
3136 DNA-arts-BAC.1-SSTO.1 3' / 5'
3136 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
45 DASS-298E13
Hschr6_MHC_SSTO_ctg1
bSS298E13
EPN details
Submitted to EMBL
12-JAN-09
BX942838.5
finished
6355 DNA-arts-BAC.1-SSTO.1 3' / 5'
6355 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
46 DASS-206K16
Hschr6_MHC_SSTO_ctg1
bSS206K16
EPN details
Submitted to EMBL
12-JAN-09
BX248321.5
finished
29117 DNA-arts-BAC.1-SSTO.1 3' / 5'
29117 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
47 DASS-357P10
Hschr6_MHC_SSTO_ctg1
bSS357P10
EPN details
Submitted to EMBL
12-JAN-09
BX247900.8
finished
75621 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 49946 bps                  
49 DASS-209N9
Hschr6_MHC_SSTO_ctg1
bSS209N9
EPN details
Submitted to EMBL
07-MAY-08
BX088580.11
finished
48454 DNA-arts-BAC.1-SSTO.1 3' / 5'
48454 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
50 DASS-343G16
Hschr6_MHC_SSTO_ctg1
bSS343G16
EPN details
Submitted to EMBL
12-JAN-09
BX470206.6
finished
58846 DNA-arts-BAC.1-SSTO.1 3' / 5'
58846 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
51 DASS-311G1
Hschr6_MHC_SSTO_ctg1
bSS311G1
EPN details
Submitted to EMBL
12-JAN-09
BX248310.3
finished
116320 DNA-arts-BAC.1-SSTO.1 3' / 5'
116320 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
52 DASS-38L18
Hschr6_MHC_SSTO_ctg1
bSS38L18
EPN details
Submitted to EMBL
12-JAN-09
BX119958.10
finished
38592 DNA-arts-BAC.1-SSTO.1 3' / 5'
38592 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
53 DASS-81K16
Hschr6_MHC_SSTO_ctg1
bSS81K16
EPN details
Submitted to EMBL
12-JAN-09
BX005439.8
finished
110001 DNA-arts-BAC.1-SSTO.1 3' / 5'
110001 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
54 DASS-370L18
Hschr6_MHC_SSTO_ctg1
bSS370L18
EPN details
Submitted to EMBL
12-JAN-09
BX682535.3
finished
4340 DNA-arts-BAC.1-SSTO.1 3' / 5'
4340 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
55 DASS-161H22
Hschr6_MHC_SSTO_ctg1
bSS161H22
EPN details
Submitted to EMBL
12-JAN-09
BX248516.6
finished
42438 DNA-arts-BAC.1-SSTO.1 3' / 5'
42438 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
56 DASS-280D8
Hschr6_MHC_SSTO_ctg1
bSS280D8
EPN details
Submitted to EMBL
12-JAN-09
BX248519.7
finished
40160 DNA-arts-BAC.1-SSTO.1 3' / 5'
40160 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
57 DASS-82G15
Hschr6_MHC_SSTO_ctg1
bSS82G15
EPN details
Submitted to EMBL
12-JAN-09
BX248305.13
finished
16685 DNA-arts-BAC.1-SSTO.1 3' / 5'
16685 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
58 DASS-336N12
Hschr6_MHC_SSTO_ctg1
bSS336N12
EPN details
Submitted to EMBL
12-JAN-09
BX511262.7
finished
69009 DNA-arts-BAC.1-SSTO.1 3' / 5'
69009 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
59 DASS-312M4
Hschr6_MHC_SSTO_ctg1
bSS312M4
EPN details
Submitted to EMBL
12-JAN-09
BX248244.7
finished
54146 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 14782 bps                  
61 DASS-324O23
Hschr6_MHC_SSTO_ctg1
bSS324O23
EPN details
Submitted to EMBL
12-JAN-09
BX248133.10
finished
38602 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 61131 bps                  
63 DASS-36P22
Hschr6_MHC_SSTO_ctg1
bSS36P22
EPN details
Submitted to EMBL
12-JAN-09
BX005460.8
finished
36497 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 23170 bps                  
65 DASS-107J21
Hschr6_MHC_SSTO_ctg1
bSS107J21
EPN details
Submitted to EMBL
12-JAN-09
BX005143.8
finished
51842 DNA-arts-BAC.1-SSTO.1 3' / 5'
51842 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
66 DASS-264H16
Hschr6_MHC_SSTO_ctg1
bSS264H16
EPN details
Submitted to EMBL
12-JAN-09
CR753822.3
finished
10388 DNA-arts-BAC.1-SSTO.1 3' / 5'
10388 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
67 DASS-307J8
Hschr6_MHC_SSTO_ctg1
bSS307J8
EPN details
Submitted to EMBL
12-JAN-09
BX679671.7
finished
96335 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 77056 bps                  
69 DASS-39F23
Hschr6_MHC_SSTO_ctg1
bSS39F23
EPN details
Submitted to EMBL
12-JAN-09
BX284686.9
finished
80063 DNA-arts-BAC.1-SSTO.1 3' / 5'
80063 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
70 DASS-105C4
Hschr6_MHC_SSTO_ctg1
bSS105C4
EPN details
Submitted to EMBL
12-JAN-09
BX284927.5
finished
108760 DNA-arts-BAC.1-SSTO.1 3' / 5'
108760 / 272
- / -
271
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
71 DASS-392K21
Hschr6_MHC_SSTO_ctg1
bSS392K21
EPN details
Submitted to EMBL
12-JAN-09
BX119999.11
finished
26037 DNA-arts-BAC.1-SSTO.1 3' / 5'
26037 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
72 DASS-380D18
Hschr6_MHC_SSTO_ctg1
bSS380D18
EPN details
Submitted to EMBL
12-JAN-09
BX255945.6
finished
96060 DNA-arts-BAC.1-SSTO.1 3' / 5'
96060 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
73 DASS-397D15
Hschr6_MHC_SSTO_ctg1
bSS397D15
EPN details
Submitted to EMBL
12-JAN-09
BX120007.9
finished
109682 DNA-arts-BAC.1-SSTO.1 3' / 5'
109682 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
74 DASS-218M11
Hschr6_MHC_SSTO_ctg1
bSS218M11
EPN details
Submitted to EMBL
12-JAN-09
BX571807.5
finished
68685 DNA-arts-BAC.1-SSTO.1 3' / 5'
68685 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
75 DASS-23B5
Hschr6_MHC_SSTO_ctg1
bSS23B5
EPN details
Submitted to EMBL
12-JAN-09
BX649210.7
finished
11133 DNA-arts-BAC.1-SSTO.1 3' / 5'
11133 / 2002
- / 1
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
76 DASS-233C19
Hschr6_MHC_SSTO_ctg1
bSS233C19
EPN details
Submitted to EMBL
12-JAN-09
BX296568.4
finished
87738 DNA-arts-BAC.1-SSTO.1 3' / 5'
87738 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
77 DASS-390M22
Hschr6_MHC_SSTO_ctg1
bSS390M22
EPN details
Submitted to EMBL
12-JAN-09
BX248406.4
finished
124787 DNA-arts-BAC.1-SSTO.1 3' / 5'
124787 / 101
- / -
100
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
78 BSS390M22_256O6
Hschr6_MHC_SSTO_ctg1
Cl/Pr BSS390M22_256O6/bSS390M22_256O6 swap
EPN details
Submitted to EMBL
12-JAN-09
BX927131.1
finished
2521 - 3' / 5'
2521 / 101
- / -
100
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
79 DASS-256O6
Hschr6_MHC_SSTO_ctg1
bSS256O6
EPN details
Submitted to EMBL
12-JAN-09
BX296564.7
finished
74846 DNA-arts-BAC.1-SSTO.1 3' / 5'
74846 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
80 DASS-193J13
Hschr6_MHC_SSTO_ctg1
bSS193J13
EPN details
Submitted to EMBL
12-JAN-09
BX682530.4
finished
19936 DNA-arts-BAC.1-SSTO.1 3' / 5'
19936 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
81 DASS-67H14
Hschr6_MHC_SSTO_ctg1
bSS67H14
EPN details
Submitted to EMBL
12-JAN-09
BX088556.11
finished
114576 DNA-arts-BAC.1-SSTO.1 3' / 5'
114576 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
82 DASS-219C23
Hschr6_MHC_SSTO_ctg1
bSS219C23
EPN details
Submitted to EMBL
12-JAN-09
BX664702.5
finished
20225 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 50000 bps                  
84 DASS-32K24
Hschr6_MHC_SSTO_ctg1
bSS32K24
EPN details
Submitted to EMBL
12-JAN-09
BX005422.5
finished
97466 DNA-arts-BAC.1-SSTO.1 3' / 5'
97466 / 2001
- / -
2000
0
Identified
2014-10-21
fetch_ncbi...
humpub
 
85 DASS-227B13
Hschr6_MHC_SSTO_ctg1
bSS227B13
EPN details
Submitted to EMBL
12-JAN-09
BX120009.10
finished
64380 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 29808 bps                  
87 DASS-241N2
Hschr6_MHC_SSTO_ctg1
bSS241N2
EPN details
Submitted to EMBL
12-JAN-09
BX248309.8
finished
29588 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 21750 bps                  
89 DASS-63A3
Hschr6_MHC_SSTO_ctg1
bSS63A3
EPN details
Submitted to EMBL
12-JAN-09
BX248408.4
finished
61953 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 50858 bps                  
91 DASS-254C22
Hschr6_MHC_SSTO_ctg1
bSS254C22
EPN details
Submitted to EMBL
12-JAN-09
BX571808.6
finished
9431 DNA-arts-BAC.1-SSTO.1        
  GAP (type-2) length 52251 bps                  
93 DASS-97D12
Hschr6_MHC_SSTO_ctg1
bSS97D12
EPN details
Submitted to EMBL
12-JAN-09
BX088650.9
finished
92518 DNA-arts-BAC.1-SSTO.1        

Statistics

Clone Summary

Number of gaps
17
Gap types
type-2
17
Total clones
76
Clone HTGS Phases
finished
76
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
134,306
Total finished length of fin clones w/ overlap
4,308,682
Total finished length of fin clones w/o overlap
4,174,376
Total overlap length of fin+unfin clones
134,306
Total finished length of fin+unfin clones w/ overlap
4,308,682
Total finished length of fin+unfin clones w/o overlap
4,174,376

Dovetails

# rank accession status length date
1 76 BX296568.4 unfinished 1 Mon, 20 Oct 2014 23:52

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Other links

* quick link - http://q.sanger.ac.uk/459d2p4c