ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_4__6 (TPF updated: 2014-04-17)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 CH501-308K3
Hschr6_MHC_MANN_ctg1
bPG308K3
EPN details
AL662890.3
finished
2 DAMA-184I15
Hschr6_MHC_MANN_ctg1
bMA184I15
EPN details
BX908720.10
finished
  GAP (type-2) length 38391 bps    
4 DAMA-219M18
Hschr6_MHC_MANN_ctg1
bMA219M18
EPN details
CR936965.7
finished
5 DAMA-52D19
Hschr6_MHC_MANN_ctg1
bMA52D19
EPN details
BX927167.6
finished
6 DAMA-297L18
Hschr6_MHC_MANN_ctg1
bMA297L18
EPN details
CR547123.3
finished
7 DAMA-405I21
Hschr6_MHC_MANN_ctg1
bMA405I21
EPN details
BX927132.7
finished
8 DAMA-148L19
Hschr6_MHC_MANN_ctg1
bMA148L19
EPN details
BX908738.4
finished
9 DAMA-334F21
Hschr6_MHC_MANN_ctg1
bMA334F21
EPN details
BX927232.4
finished
10 DAMA-61E19
Hschr6_MHC_MANN_ctg1
bMA61E19
EPN details
BX927133.5
finished
11 DAMA-380P17
Hschr6_MHC_MANN_ctg1
bMA380P17
EPN details
BX927223.9
finished
12 DAMA-186H17
Hschr6_MHC_MANN_ctg1
bMA186H17
EPN details
CR388210.7
finished
13 DAMA-364L23
Hschr6_MHC_MANN_ctg1
bMA364L23
EPN details
BX927250.5
finished
14 DAMA-80H6
Hschr6_MHC_MANN_ctg1
bMA80H6
EPN details
BX927182.6
finished
15 DAMA-50J3
Hschr6_MHC_MANN_ctg1
bMA50J3
EPN details
BX927141.7
finished
16 DAMA-247D1
Hschr6_MHC_MANN_ctg1
bMA247D1
EPN details
CR382333.7
finished
17 DAMA-377D17
Hschr6_MHC_MANN_ctg1
bMA377D17
EPN details
BX927229.6
finished
18 DAMA-291L16
Hschr6_MHC_MANN_ctg1
bMA291L16
EPN details
CT009552.2
finished
  GAP (type-2) length 50000 bps    
20 DAMA-361I19
Hschr6_MHC_MANN_ctg1
bMA361I19
EPN details
BX927221.6
finished
21 DAMA-83L10
Hschr6_MHC_MANN_ctg1
bMA83L10
EPN details
BX927189.6
finished
22 DAMA-368F21
Hschr6_MHC_MANN_ctg1
bMA368F21
EPN details
BX927214.4
finished
23 DAMA-55G21
Hschr6_MHC_MANN_ctg1
bMA55G21
EPN details
BX927143.4
finished
24 DAMA-277I14
Hschr6_MHC_MANN_ctg1
bMA277I14
EPN details
CR382280.5
finished
25 DAMA-199F12
Hschr6_MHC_MANN_ctg1
bMA199F12
EPN details
BX927220.8
finished
26 DAMA-178G23
Hschr6_MHC_MANN_ctg1
bMA178G23
EPN details
BX908728.7
finished
27 DAMA-26D6
Hschr6_MHC_MANN_ctg1
bMA26D6
EPN details
BX927283.4
finished
  GAP (type-2) length 8701 bps    
29 DAMA-63A3
Hschr6_MHC_MANN_ctg1
bMA63A3
EPN details
CT009501.6
finished
30 DAMA-220E23
Hschr6_MHC_MANN_ctg1
bMA220E23
EPN details
CR847861.4
finished
31 DAMA-342O2
Hschr6_MHC_MANN_ctg1
bMA342O2
EPN details
BX927194.9
finished
  GAP (type-2) length 24813 bps    
33 DAMA-153A13
Hschr6_MHC_MANN_ctg1
bMA153A13
EPN details
CT009610.7
finished
  GAP (type-2) length 12319 bps    
35 DAMA-72F24
Hschr6_MHC_MANN_ctg1
bMA72F24
EPN details
BX927139.8
finished
36 DAMA-213L4
Hschr6_MHC_MANN_ctg1
bMA213L4
EPN details
CR847794.5
finished
  GAP (type-2) length 23910 bps    
38 DAMA-198I19
Hschr6_MHC_MANN_ctg1
bMA198I19
EPN details
CR847781.3
finished
39 DAMA-387C9
Hschr6_MHC_MANN_ctg1
bMA387C9
EPN details
BX927178.8
finished
40 DAMA-187L7
Hschr6_MHC_MANN_ctg1
bMA187L7
EPN details
CR318637.4
finished
41 DAMA-345G11
Hschr6_MHC_MANN_ctg1
bMA345G11
EPN details
CR847852.10
finished
  GAP (type-2) length 38947 bps    
43 DAMA-25N12
Hschr6_MHC_MANN_ctg1
bMA25N12
EPN details
BX927320.5
finished
44 DAMA-335N23
Hschr6_MHC_MANN_ctg1
bMA335N23
EPN details
CR925833.3
finished
  GAP (type-2) length 8460 bps    
46 DAMA-236L13
Hschr6_MHC_MANN_ctg1
bMA236L13
EPN details
CR354443.4
finished
  GAP (type-2) length 89346 bps    
48 DAMA-196C9
Hschr6_MHC_MANN_ctg1
bMA196C9
EPN details
CR933877.4
finished
  GAP (type-2) length 52932 bps    
50 DAMA-89M7
Hschr6_MHC_MANN_ctg1
bMA89M7
EPN details
CR933857.3
finished
51 DAMA-163J4
Hschr6_MHC_MANN_ctg1
bMA163J4
EPN details
CR388180.5
finished
  GAP (type-2) length 113131 bps    
53 DAMA-239A17
Hschr6_MHC_MANN_ctg1
bMA239A17
EPN details
CR547132.3
finished
  GAP (type-2) length 38609 bps    
55 DAMA-358M23
Hschr6_MHC_MANN_ctg1
bMA358M23
EPN details
BX927239.5
finished
  GAP (type-2) length 4286 bps    
57 DAMA-333A22
Hschr6_MHC_MANN_ctg1
bMA333A22
EPN details
CR753609.4
finished
58 DAMA-391O5
Hschr6_MHC_MANN_ctg1
bMA391O5
EPN details
BX927180.9
finished
59 DAMA-178J18
Hschr6_MHC_MANN_ctg1
bMA178J18
EPN details
BX908732.13
finished
60 DAMA-224B5
Hschr6_MHC_MANN_ctg1
bMA224B5
EPN details
CR354545.5
finished
61 DAMA-25D9
Hschr6_MHC_MANN_ctg1
bMA25D9
EPN details
BX927235.7
finished
  GAP (type-2) length 31249 bps    
63 DAMA-109M12
Hschr6_MHC_MANN_ctg1
bMA109M12
EPN details
CR933540.9
finished
64 DAMA-265D9
Hschr6_MHC_MANN_ctg1
bMA265D9
EPN details
CR753835.3
finished
65 DAMA-367I24
Hschr6_MHC_MANN_ctg1
bMA367I24
EPN details
BX927168.11
finished
66 DAMA-57K5
Hschr6_MHC_MANN_ctg1
bMA57K5
EPN details
BX927160.7
finished
67 DAMA-273O23
Hschr6_MHC_MANN_ctg1
bMA273O23
EPN details
CR752661.4
finished
  GAP (type-2) length 8145 bps    
69 DAMA-353C16
Hschr6_MHC_MANN_ctg1
bMA353C16
EPN details
CT009500.4
finished
70 DAMA-91I23
Hschr6_MHC_MANN_ctg1
bMA91I23
EPN details
BX927138.5
finished
71 DAMA-147C13
Hschr6_MHC_MANN_ctg1
bMA147C13
EPN details
BX908719.9
finished
72 DAMA-214M2
Hschr6_MHC_MANN_ctg1
bMA214M2
EPN details
CR936909.2
finished
  GAP (type-2) length 39283 bps    
74 DAMA-245O6
Hschr6_MHC_MANN_ctg1
bMA245O6
EPN details
CR847849.5
finished
75 DAMA-248N13
Hschr6_MHC_MANN_ctg1
bMA248N13
EPN details
CR354565.6
finished
76 DAMA-222K3
Hschr6_MHC_MANN_ctg1
bMA222K3
EPN details
CR847841.4
finished
77 DAMA-258A19
Hschr6_MHC_MANN_ctg1
bMA258A19
EPN details
CR547129.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 13289 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 AL662890.3 1 13289 +
13290 145817 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 2 BX908720.10 1 132528 +
145818 184208 3 N 38391 contig yes # ALIGN GENUS
184209 210806 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 CR936965.7 1 26598 +
210807 333150 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927167.6 2001 124344 +
333151 391186 6 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 CR547123.3 2001 60036 +
391187 482697 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927132.7 2001 93511 +
482698 575574 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX908738.4 2001 94877 +
575575 673296 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927232.4 2001 99722 +
673297 778755 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927133.5 2001 107459 +
778756 860404 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927223.9 2001 83649 +
860405 922600 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 CR388210.7 2001 64196 +
922601 1013230 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927250.5 2001 92630 +
1013231 1062879 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927182.6 2001 51649 +
1062880 1186284 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927141.7 2001 125405 +
1186285 1237057 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 CR382333.7 2001 52773 +
1237058 1347684 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 BX927229.6 2001 112627 +
1347685 1388777 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 4 - 18 CT009552.2 2001 43093 +
1388778 1438777 19 N 50000 contig yes # ALIGN GENUS
1438778 1511786 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927221.6 1 73009 +
1511787 1634116 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927189.6 2001 124330 +
1634117 1745806 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927214.4 2001 113690 +
1745807 1803414 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927143.4 2001 59608 +
1803415 1829690 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 CR382280.5 2001 28276 +
1829691 1910414 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927220.8 2001 82724 +
1910415 2013169 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX908728.7 2001 104755 +
2013170 2047385 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 20 - 27 BX927283.4 2001 36216 +
2047386 2056086 28 N 8701 contig yes # ALIGN GENUS
2056087 2129222 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CT009501.6 1 73136 +
2129223 2143970 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 CR847861.4 2001 16748 +
2143971 2252178 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 31 BX927194.9 2001 110208 +
2252179 2276991 32 N 24813 contig yes # ALIGN GENUS
2276992 2312256 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 33 - 33 CT009610.7 1 35265 +
2312257 2324575 34 N 12319 contig yes # ALIGN GENUS
2324576 2459971 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 36 BX927139.8 1 135396 +
2459972 2517017 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 35 - 36 CR847794.5 2001 59046 +
2517018 2540927 37 N 23910 contig yes # ALIGN GENUS
2540928 2577355 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 41 CR847781.3 1 36428 +
2577356 2681554 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 41 BX927178.8 2001 106199 +
2681555 2717770 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 41 CR318637.4 2001 38216 +
2717771 2771971 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 41 CR847852.10 2001 56201 +
2771972 2810918 42 N 38947 contig yes # ALIGN GENUS
2810919 2911327 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 44 BX927320.5 1 100409 +
2911328 2921061 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 43 - 44 CR925833.3 2001 11734 +
2921062 2929521 45 N 8460 contig yes # ALIGN GENUS
2929522 3062072 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 46 - 46 CR354443.4 1 132551 +
3062073 3151418 47 N 89346 contig yes # ALIGN GENUS
3151419 3174236 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 48 - 48 CR933877.4 1 22818 +
3174237 3227168 49 N 52932 contig yes # ALIGN GENUS
3227169 3260791 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 51 CR933857.3 1 33623 +
3260792 3261326 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 50 - 51 CR388180.5 1335 1869 +
3261327 3374457 52 N 113131 contig yes # ALIGN GENUS
3374458 3412223 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 53 - 53 CR547132.3 1 37766 +
3412224 3450832 54 N 38609 contig yes # ALIGN GENUS
3450833 3553420 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 55 BX927239.5 1 102588 +
3553421 3557706 56 N 4286 contig yes # ALIGN GENUS
3557707 3575986 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 61 CR753609.4 1 18280 +
3575987 3643460 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 61 BX927180.9 2001 69474 +
3643461 3743320 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 61 BX908732.13 2001 101860 +
3743321 3797815 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 61 CR354545.5 2001 56495 +
3797816 3895057 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 61 BX927235.7 2001 99242 +
3895058 3926306 62 N 31249 contig yes # ALIGN GENUS
3926307 3963736 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 67 CR933540.9 1 37430 +
3963737 4062800 64 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 67 CR753835.3 2001 101064 +
4062801 4170126 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 67 BX927168.11 2001 109326 +
4170127 4207734 66 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 67 BX927160.7 2001 39608 +
4207735 4236915 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 67 CR752661.4 2001 31181 +
4236916 4245060 68 N 8145 contig yes # ALIGN GENUS
4245061 4259728 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 72 CT009500.4 1 14668 +
4259729 4368584 70 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 72 BX927138.5 2001 110856 +
4368585 4402814 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 72 BX908719.9 2001 36230 +
4402815 4441623 72 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 72 CR936909.2 2001 40809 +
4441624 4480906 73 N 39283 contig yes # ALIGN GENUS
4480907 4569069 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 77 CR847849.5 1 88163 +
4569070 4628951 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 77 CR354565.6 2001 61882 +
4628952 4635350 76 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 77 CR847841.4 2001 8399 +
4635351 4683228 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 74 - 77 CR547129.3 2001 49878 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 CH501-308K3
Hschr6_MHC_MANN_ctg1
bPG308K3
EPN details
Submitted to EMBL
12-JAN-09
AL662890.3
finished
137288 CHORI-501 3' / 5'
13289 / 1
- / -
123945
0.06
Identified
2014-04-09
fetch_ncbi...
humpub
 
2 DAMA-184I15
Hschr6_MHC_MANN_ctg1
bMA184I15
EPN details
Submitted to EMBL
12-JAN-09
BX908720.10
finished
132528 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 38391 bps                  
4 DAMA-219M18
Hschr6_MHC_MANN_ctg1
bMA219M18
EPN details
Submitted to EMBL
12-JAN-09
CR936965.7
finished
26598 DNA-Arts BAC library MANN.1 3' / 5'
26598 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 DAMA-52D19
Hschr6_MHC_MANN_ctg1
bMA52D19
EPN details
Submitted to EMBL
12-JAN-09
BX927167.6
finished
124344 DNA-Arts BAC library MANN.1 3' / 5'
124344 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
6 DAMA-297L18
Hschr6_MHC_MANN_ctg1
bMA297L18
EPN details
Submitted to EMBL
12-JAN-09
CR547123.3
finished
60036 DNA-Arts BAC library MANN.1 3' / 5'
60036 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
7 DAMA-405I21
Hschr6_MHC_MANN_ctg1
bMA405I21
EPN details
Submitted to EMBL
12-JAN-09
BX927132.7
finished
93511 DNA-Arts BAC library MANN.1 3' / 5'
93511 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
8 DAMA-148L19
Hschr6_MHC_MANN_ctg1
bMA148L19
EPN details
Submitted to EMBL
12-JAN-09
BX908738.4
finished
94877 DNA-Arts BAC library MANN.1 3' / 5'
94877 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
9 DAMA-334F21
Hschr6_MHC_MANN_ctg1
bMA334F21
EPN details
Submitted to EMBL
12-JAN-09
BX927232.4
finished
99722 DNA-Arts BAC library MANN.1 3' / 5'
99722 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
10 DAMA-61E19
Hschr6_MHC_MANN_ctg1
bMA61E19
EPN details
Submitted to EMBL
12-JAN-09
BX927133.5
finished
107459 DNA-Arts BAC library MANN.1 3' / 5'
107459 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
11 DAMA-380P17
Hschr6_MHC_MANN_ctg1
bMA380P17
EPN details
Submitted to EMBL
12-JAN-09
BX927223.9
finished
83649 DNA-Arts BAC library MANN.1 3' / 5'
83649 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
12 DAMA-186H17
Hschr6_MHC_MANN_ctg1
bMA186H17
EPN details
Submitted to EMBL
12-JAN-09
CR388210.7
finished
64196 DNA-Arts BAC library MANN.1 3' / 5'
64196 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
13 DAMA-364L23
Hschr6_MHC_MANN_ctg1
bMA364L23
EPN details
Submitted to EMBL
12-JAN-09
BX927250.5
finished
92630 DNA-Arts BAC library MANN.1 3' / 5'
92630 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
14 DAMA-80H6
Hschr6_MHC_MANN_ctg1
bMA80H6
EPN details
Submitted to EMBL
12-JAN-09
BX927182.6
finished
51649 DNA-Arts BAC library MANN.1 3' / 5'
51649 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
15 DAMA-50J3
Hschr6_MHC_MANN_ctg1
bMA50J3
EPN details
Submitted to EMBL
12-JAN-09
BX927141.7
finished
125405 DNA-Arts BAC library MANN.1 3' / 5'
125405 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
16 DAMA-247D1
Hschr6_MHC_MANN_ctg1
bMA247D1
EPN details
Submitted to EMBL
12-JAN-09
CR382333.7
finished
52773 DNA-Arts BAC library MANN.1 3' / 5'
52773 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
17 DAMA-377D17
Hschr6_MHC_MANN_ctg1
bMA377D17
EPN details
Submitted to EMBL
12-JAN-09
BX927229.6
finished
112627 DNA-Arts BAC library MANN.1 3' / 5'
112627 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
18 DAMA-291L16
Hschr6_MHC_MANN_ctg1
bMA291L16
EPN details
Submitted to EMBL
12-JAN-09
CT009552.2
finished
43093 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 50000 bps                  
20 DAMA-361I19
Hschr6_MHC_MANN_ctg1
bMA361I19
EPN details
Submitted to EMBL
12-JAN-09
BX927221.6
finished
73009 DNA-Arts BAC library MANN.1 3' / 5'
73009 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
21 DAMA-83L10
Hschr6_MHC_MANN_ctg1
bMA83L10
EPN details
Submitted to EMBL
12-JAN-09
BX927189.6
finished
124330 DNA-Arts BAC library MANN.1 3' / 5'
124330 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
22 DAMA-368F21
Hschr6_MHC_MANN_ctg1
bMA368F21
EPN details
Submitted to EMBL
12-JAN-09
BX927214.4
finished
113690 DNA-Arts BAC library MANN.1 3' / 5'
113690 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
23 DAMA-55G21
Hschr6_MHC_MANN_ctg1
bMA55G21
EPN details
Submitted to EMBL
12-JAN-09
BX927143.4
finished
59608 DNA-Arts BAC library MANN.1 3' / 5'
59608 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
24 DAMA-277I14
Hschr6_MHC_MANN_ctg1
bMA277I14
EPN details
Submitted to EMBL
12-JAN-09
CR382280.5
finished
28276 DNA-Arts BAC library MANN.1 3' / 5'
28276 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
25 DAMA-199F12
Hschr6_MHC_MANN_ctg1
bMA199F12
EPN details
Submitted to EMBL
12-JAN-09
BX927220.8
finished
82724 DNA-Arts BAC library MANN.1 3' / 5'
82724 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
26 DAMA-178G23
Hschr6_MHC_MANN_ctg1
bMA178G23
EPN details
Submitted to EMBL
12-JAN-09
BX908728.7
finished
104755 DNA-Arts BAC library MANN.1 3' / 5'
104755 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
27 DAMA-26D6
Hschr6_MHC_MANN_ctg1
bMA26D6
EPN details
Submitted to EMBL
12-JAN-09
BX927283.4
finished
36216 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 8701 bps                  
29 DAMA-63A3
Hschr6_MHC_MANN_ctg1
bMA63A3
EPN details
Submitted to EMBL
12-JAN-09
CT009501.6
finished
73136 DNA-Arts BAC library MANN.1 3' / 5'
73136 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
30 DAMA-220E23
Hschr6_MHC_MANN_ctg1
bMA220E23
EPN details
Submitted to EMBL
12-JAN-09
CR847861.4
finished
16748 DNA-Arts BAC library MANN.1 3' / 5'
16748 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
31 DAMA-342O2
Hschr6_MHC_MANN_ctg1
bMA342O2
EPN details
Submitted to EMBL
12-JAN-09
BX927194.9
finished
110208 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 24813 bps                  
33 DAMA-153A13
Hschr6_MHC_MANN_ctg1
bMA153A13
EPN details
Submitted to EMBL
12-JAN-09
CT009610.7
finished
35265 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 12319 bps                  
35 DAMA-72F24
Hschr6_MHC_MANN_ctg1
bMA72F24
EPN details
Submitted to EMBL
12-JAN-09
BX927139.8
finished
135396 DNA-Arts BAC library MANN.1 3' / 5'
135396 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
36 DAMA-213L4
Hschr6_MHC_MANN_ctg1
bMA213L4
EPN details
Submitted to EMBL
12-JAN-09
CR847794.5
finished
59046 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 23910 bps                  
38 DAMA-198I19
Hschr6_MHC_MANN_ctg1
bMA198I19
EPN details
Analysed
10-NOV-04
CR847781.3
finished
36428 DNA-Arts BAC library MANN.1 3' / 5'
36428 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
39 DAMA-387C9
Hschr6_MHC_MANN_ctg1
bMA387C9
EPN details
Submitted to EMBL
12-JAN-09
BX927178.8
finished
106199 DNA-Arts BAC library MANN.1 3' / 5'
106199 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
40 DAMA-187L7
Hschr6_MHC_MANN_ctg1
bMA187L7
EPN details
Submitted to EMBL
12-JAN-09
CR318637.4
finished
38216 DNA-Arts BAC library MANN.1 3' / 5'
38216 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
41 DAMA-345G11
Hschr6_MHC_MANN_ctg1
bMA345G11
EPN details
Submitted to EMBL
12-JAN-09
CR847852.10
finished
56201 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 38947 bps                  
43 DAMA-25N12
Hschr6_MHC_MANN_ctg1
bMA25N12
EPN details
Submitted to EMBL
12-JAN-09
BX927320.5
finished
100409 DNA-Arts BAC library MANN.1 3' / 5'
100409 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
44 DAMA-335N23
Hschr6_MHC_MANN_ctg1
bMA335N23
EPN details
Submitted to EMBL
12-JAN-09
CR925833.3
finished
11734 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 8460 bps                  
46 DAMA-236L13
Hschr6_MHC_MANN_ctg1
bMA236L13
EPN details
Analysed
12-APR-11
CR354443.4
finished
132551 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 89346 bps                  
48 DAMA-196C9
Hschr6_MHC_MANN_ctg1
bMA196C9
EPN details
Submitted to EMBL
12-JAN-09
CR933877.4
finished
22818 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 52932 bps                  
50 DAMA-89M7
Hschr6_MHC_MANN_ctg1
bMA89M7
EPN details
Submitted to EMBL
12-JAN-09
CR933857.3
finished
33623 DNA-Arts BAC library MANN.1 3' / 5'
33623 / 1335
- / -
1334
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
51 DAMA-163J4
Hschr6_MHC_MANN_ctg1
bMA163J4
EPN details
Submitted to EMBL
12-JAN-09
CR388180.5
finished
1869 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 113131 bps                  
53 DAMA-239A17
Hschr6_MHC_MANN_ctg1
bMA239A17
EPN details
Submitted to EMBL
12-JAN-09
CR547132.3
finished
37766 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 38609 bps                  
55 DAMA-358M23
Hschr6_MHC_MANN_ctg1
bMA358M23
EPN details
Submitted to EMBL
12-JAN-09
BX927239.5
finished
102588 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 4286 bps                  
57 DAMA-333A22
Hschr6_MHC_MANN_ctg1
bMA333A22
EPN details
Submitted to EMBL
12-JAN-09
CR753609.4
finished
18280 DNA-Arts BAC library MANN.1 3' / 5'
18280 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
58 DAMA-391O5
Hschr6_MHC_MANN_ctg1
bMA391O5
EPN details
Submitted to EMBL
12-JAN-09
BX927180.9
finished
69474 DNA-Arts BAC library MANN.1 3' / 5'
69474 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
59 DAMA-178J18
Hschr6_MHC_MANN_ctg1
bMA178J18
EPN details
Submitted to EMBL
12-JAN-09
BX908732.13
finished
101860 DNA-Arts BAC library MANN.1 3' / 5'
101860 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
60 DAMA-224B5
Hschr6_MHC_MANN_ctg1
bMA224B5
EPN details
Submitted to EMBL
12-JAN-09
CR354545.5
finished
56495 DNA-Arts BAC library MANN.1 3' / 5'
56495 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
61 DAMA-25D9
Hschr6_MHC_MANN_ctg1
bMA25D9
EPN details
Submitted to EMBL
12-JAN-09
BX927235.7
finished
99242 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 31249 bps                  
63 DAMA-109M12
Hschr6_MHC_MANN_ctg1
bMA109M12
EPN details
Submitted to EMBL
12-JAN-09
CR933540.9
finished
37430 DNA-Arts BAC library MANN.1 3' / 5'
37430 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
64 DAMA-265D9
Hschr6_MHC_MANN_ctg1
bMA265D9
EPN details
Submitted to EMBL
12-JAN-09
CR753835.3
finished
101064 DNA-Arts BAC library MANN.1 3' / 5'
101064 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
65 DAMA-367I24
Hschr6_MHC_MANN_ctg1
bMA367I24
EPN details
Submitted to EMBL
12-JAN-09
BX927168.11
finished
109326 DNA-Arts BAC library MANN.1 3' / 5'
109326 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
66 DAMA-57K5
Hschr6_MHC_MANN_ctg1
bMA57K5
EPN details
Submitted to EMBL
12-JAN-09
BX927160.7
finished
39608 DNA-Arts BAC library MANN.1 3' / 5'
39608 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
67 DAMA-273O23
Hschr6_MHC_MANN_ctg1
bMA273O23
EPN details
Submitted to EMBL
12-JAN-09
CR752661.4
finished
31181 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 8145 bps                  
69 DAMA-353C16
Hschr6_MHC_MANN_ctg1
bMA353C16
EPN details
Submitted to EMBL
12-JAN-09
CT009500.4
finished
14668 DNA-Arts BAC library MANN.1 3' / 5'
14668 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
70 DAMA-91I23
Hschr6_MHC_MANN_ctg1
bMA91I23
EPN details
Submitted to EMBL
12-JAN-09
BX927138.5
finished
110856 DNA-Arts BAC library MANN.1 3' / 5'
110856 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
71 DAMA-147C13
Hschr6_MHC_MANN_ctg1
bMA147C13
EPN details
Submitted to EMBL
12-JAN-09
BX908719.9
finished
36230 DNA-Arts BAC library MANN.1 3' / 5'
36230 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
72 DAMA-214M2
Hschr6_MHC_MANN_ctg1
bMA214M2
EPN details
Submitted to EMBL
12-JAN-09
CR936909.2
finished
40809 DNA-Arts BAC library MANN.1        
  GAP (type-2) length 39283 bps                  
74 DAMA-245O6
Hschr6_MHC_MANN_ctg1
bMA245O6
EPN details
Submitted to EMBL
12-JAN-09
CR847849.5
finished
88163 DNA-Arts BAC library MANN.1 3' / 5'
88163 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
75 DAMA-248N13
Hschr6_MHC_MANN_ctg1
bMA248N13
EPN details
Submitted to EMBL
12-JAN-09
CR354565.6
finished
61882 DNA-Arts BAC library MANN.1 3' / 5'
61882 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
76 DAMA-222K3
Hschr6_MHC_MANN_ctg1
bMA222K3
EPN details
Submitted to EMBL
12-JAN-09
CR847841.4
finished
8399 DNA-Arts BAC library MANN.1 3' / 5'
8399 / 2001
- / -
2000
0
Identified
2014-04-09
fetch_ncbi...
humpub
 
77 DAMA-258A19
Hschr6_MHC_MANN_ctg1
bMA258A19
EPN details
Submitted to EMBL
12-JAN-09
CR547129.3
finished
49878 DNA-Arts BAC library MANN.1        

Statistics

Clone Summary

Number of gaps
16
Gap types
type-2
16
Total clones
61
Clone HTGS Phases
finished
61
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
209,279
Total finished length of fin clones w/ overlap
4,310,039
Total finished length of fin clones w/o overlap
4,100,760
Total overlap length of fin+unfin clones
209,279
Total finished length of fin+unfin clones w/ overlap
4,310,039
Total finished length of fin+unfin clones w/o overlap
4,100,760

Search

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Other links

* quick link - http://q.sanger.ac.uk/c0mekm1a