ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_2__12 (TPF updated: 2015-08-31)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 RP11-144O23
HSCHR12_3_CTG2
bA144O23
AC006518.17
finished
2 RP11-673D15
HSCHR12_3_CTG2
bA673D15
AC018630.40
finished
3 CH17-26M1
HSCHR12_3_CTG2
bMO26M1
AC245078.1
finished
4 CH17-457D18
HSCHR12_3_CTG2
bMO457D18
AC244131.2
finished
5 RP11-711K1
HSCHR12_3_CTG2
bA711K1
AC010176.12
finished

AGP

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AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 173735 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC006518.17 1 173735 +
173736 174886 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC018630.40 164713 165863 -
174887 375585 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC245078.1 1 200699 +
375586 462576 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC244131.2 69558 156548 -
462577 572554 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC010176.12 1 109978 -

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
0
Total clones
5
Clone HTGS Phases
finished
5
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
362,550
Total finished length of fin clones w/ overlap
946,751
Total finished length of fin clones w/o overlap
584,201
Total overlap length of fin+unfin clones
362,550
Total finished length of fin+unfin clones w/ overlap
946,751
Total finished length of fin+unfin clones w/o overlap
584,201

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* quick link - http://q.sanger.ac.uk/xvljq4ww