ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_1__6 (TPF updated: 2015-05-22)

TPF

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# Clone ext/Contig Clone int Acc/Fin
1 CH501-308K3
Hschr6_MHC_APD_ctg1
bPG308K3
AL662890.3
finished
2 DAAP-101P24
Hschr6_MHC_APD_ctg1
bAP101P24
CR759954.9
finished
3 DAAP-182E11
Hschr6_MHC_APD_ctg1
bAP182E11
CR759942.12
finished
  GAP (type-2) length 44253 bps    
5 DAAP-223O5
Hschr6_MHC_APD_ctg1
bAP223O5
CR759957.2
finished
  GAP (type-2) length 29384 bps    
7 DAAP-334J16
Hschr6_MHC_APD_ctg1
bAP334J16
CR942175.3
finished
8 DAAP-270H14
Hschr6_MHC_APD_ctg1
bAP270H14
CR774181.3
finished
  GAP (type-2) length 87598 bps    
10 DAAP-191E6
Hschr6_MHC_APD_ctg1
bAP191E6
CR936918.2
finished
  GAP (type-2) length 104192 bps    
12 DAAP-34I1
Hschr6_MHC_APD_ctg1
bAP34I1
CR848056.4
finished
13 DAAP-341G9
Hschr6_MHC_APD_ctg1
bAP341G9
CR759956.2
finished
14 DAAP-188P13
Hschr6_MHC_APD_ctg1
bAP188P13
CR788300.6
finished
15 DAAP-35D11
Hschr6_MHC_APD_ctg1
bAP35D11
CR936483.10
finished
  GAP (type-2) length 19123 bps    
17 DAAP-87K10
Hschr6_MHC_APD_ctg1
bAP87K10
CR762489.4
finished
  GAP (type-2) length 59377 bps    
19 DAAP-84C21
Hschr6_MHC_APD_ctg1
bAP84C21
CR925767.6
finished
20 XX-BAP84C21_BAP349F14
Hschr6_MHC_APD_ctg1
BAP84C21_BAP349F14
CU019528.1
finished
21 DAAP-349F14
Hschr6_MHC_APD_ctg1
bAP349F14
CT009496.3
finished
22 DAAP-388C10
Hschr6_MHC_APD_ctg1
bAP388C10
CR759913.4
finished
  GAP (type-2) length 24594 bps    
24 DAAP-21A6
Hschr6_MHC_APD_ctg1
bAP21A6
CR759943.6
finished
25 DAAP-65D20
Hschr6_MHC_APD_ctg1
bAP65D20
CR759960.3
finished
  GAP (type-2) length 9746 bps    
27 DAAP-112O13
Hschr6_MHC_APD_ctg1
bAP112O13
CR925727.3
finished
  GAP (type-2) length 2931 bps    
29 DAAP-200B17
Hschr6_MHC_APD_ctg1
bAP200B17
CR788282.3
finished
30 DAAP-384I23
Hschr6_MHC_APD_ctg1
bAP384I23
CT009520.5
finished
  GAP (type-2) length 104591 bps    
32 DAAP-374K6
Hschr6_MHC_APD_ctg1
bAP374K6
CT009538.5
finished
  GAP (type-2) length 16440 bps    
34 DAAP-385L22
Hschr6_MHC_APD_ctg1
bAP385L22
CR759928.10
finished
35 DAAP-56K16
Hschr6_MHC_APD_ctg1
bAP56K16
CR759890.6
finished
36 DAAP-334P6
Hschr6_MHC_APD_ctg1
bAP334P6
CR774188.4
finished
  GAP (type-2) length 49753 bps    
38 DAAP-394O23
Hschr6_MHC_APD_ctg1
bAP394O23
CR759912.6
finished
  GAP (type-2) length 103871 bps    
40 DAAP-285E11
Hschr6_MHC_APD_ctg1
bAP285E11
CR759873.4
finished
  GAP (type-2) length 154558 bps    
42 DAAP-278B20
Hschr6_MHC_APD_ctg1
bAP278B20
CR936908.2
finished
  GAP (type-2) length 85167 bps    
44 DAAP-280C10
Hschr6_MHC_APD_ctg1
bAP280C10
CR759911.5
finished
45 DAAP-223I5
Hschr6_MHC_APD_ctg1
bAP223I5
CR759964.5
finished
46 DAAP-143K21
Hschr6_MHC_APD_ctg1
bAP143K21
CT009481.4
finished
47 DAAP-319K1
Hschr6_MHC_APD_ctg1
bAP319K1
CR762477.4
finished
  GAP (type-2) length 401260 bps    
49 DAAP-210H10
Hschr6_MHC_APD_ctg1
bAP210H10
CR788288.6
finished
50 DAAP-97M17
Hschr6_MHC_APD_ctg1
bAP97M17
CT009531.8
finished
  GAP (type-2) length 36752 bps    
52 DAAP-90L16
Hschr6_MHC_APD_ctg1
bAP90L16
CR759886.7
finished
53 DAAP-300H15
Hschr6_MHC_APD_ctg1
bAP300H15
CR759905.4
finished
  GAP (type-2) length 142825 bps    
55 DAAP-21F2
Hschr6_MHC_APD_ctg1
bAP21F2
CR759915.6
finished
  GAP (type-2) length 13507 bps    
57 DAAP-222I20
Hschr6_MHC_APD_ctg1
bAP222I20
CR942273.7
finished
58 DAAP-66K18
Hschr6_MHC_APD_ctg1
bAP66K18
CR936237.6
finished
  GAP (type-2) length 174972 bps    
60 DAAP-193O6
Hschr6_MHC_APD_ctg1
bAP193O6
CR936919.4
finished
61 DAAP-344N11
Hschr6_MHC_APD_ctg1
bAP344N11
CT010586.5
finished
  GAP (type-2) length 45267 bps    
63 DAAP-218M18
Hschr6_MHC_APD_ctg1
bAP218M18
CR812478.6
finished
  GAP (type-2) length 103035 bps    
65 DAAP-279L6
Hschr6_MHC_APD_ctg1
bAP279L6
CT009614.5
finished
  GAP (type-2) length 3653 bps    
67 DAAP-282D22
Hschr6_MHC_APD_ctg1
bAP282D22
CR759917.3
finished
  GAP (type-2) length 39571 bps    
69 DAAP-380K20
Hschr6_MHC_APD_ctg1
bAP380K20
CR759919.3
finished
  GAP (type-2) length 3322 bps    
71 DAAP-349F20
Hschr6_MHC_APD_ctg1
bAP349F20
CR788283.2
finished
  GAP (type-2) length 180236 bps    
73 DAAP-381D23
Hschr6_MHC_APD_ctg1
bAP381D23
CR936921.7
finished
74 DAAP-57C1
Hschr6_MHC_APD_ctg1
bAP57C1
CR762476.2
finished
75 DAAP-27A1
Hschr6_MHC_APD_ctg1
bAP27A1
CR936913.7
finished
  GAP (type-2) length 53709 bps    
77 DAAP-277G18
Hschr6_MHC_APD_ctg1
bAP277G18
CR759904.5
finished
78 DAAP-90E5
Hschr6_MHC_APD_ctg1
bAP90E5
CT009497.8
finished
  GAP (type-2) length 207856 bps    
80 DAAP-220E17
Hschr6_MHC_APD_ctg1
bAP220E17
CT009514.7
finished
  GAP (type-3) length unknown    
82 RP1-232L24
Hschr6_1_ctg2
CONTAINER
dJ232L24
AL078601.10
finished
83 ABC9-44043600B8
Hschr6_1_ctg2
CONTAINED
f9A44043600B8
AC209234.3
finished
82 RP1-232L24
Hschr6_1_ctg2
CONTAINER
dJ232L24
AL078601.10
finished
  GAP (type-3) length unknown    
85 RP11-35J6
Hschr6_1_ctg3
CONTAINER
bA35J6
AL513210.32
finished
86 ABC11-48431600C18
Hschr6_1_ctg3
CONTAINED
f11A48431600C18
AC225168.3
finished
85 RP11-35J6
Hschr6_1_ctg3
CONTAINER
bA35J6
AL513210.32
finished
  GAP (type-3) length unknown    
88 RP1-266L20
Hschr6_1_ctg4
dJ266L20
AL354892.19
finished
89 RP1-182D15
Hschr6_1_ctg4
dJ182D15
AL049612.11
finished
90 ABC10-44589700B18
Hschr6_1_ctg4
f10A44589700B18
FP565795.1
finished
  GAP (type-3) length unknown    
92 RP5-894D12
Hschr6_1_ctg5
dJ894D12
AL078605.30
finished
93 ABC16-1637M24
Hschr6_1_ctg5
f16A1637M24
AC239411.3
finished
94 RP1-140C12
Hschr6_1_ctg5
dJ140C12
AL008628.1
finished
  GAP (type-3) length unknown    
96 RP11-423B13
Hschr6_1_ctg6
CONTAINER
bA423B13
AL593854.6
finished
97 ABC14-50969100A21
Hschr6_1_ctg6
CONTAINED
f14A50969100A21
AC231958.1
finished
96 RP11-423B13
Hschr6_1_ctg6
CONTAINER
bA423B13
AL593854.6
finished
  GAP (type-3) length unknown    
99 RP11-707M13
Hschr6_1_ctg7
CONTAINER
bA707M13
AL391500.13
finished
100 ABC11-779768N8
Hschr6_1_ctg7
CONTAINED
f11A779768N8
AC216138.3
finished
99 RP11-707M13
Hschr6_1_ctg7
CONTAINER
bA707M13
AL391500.13
finished
  GAP (type-3) length unknown    
102 RP11-325O24
Hschr6_1_ctg8
bA325O24
AL356432.17
finished
103 RP11-96B21
Hschr6_1_ctg8
bA96B21
AL365224.8
finished
104 RP3-480J14
Hschr6_1_ctg8
dJ480J14
AL035470.10
finished
105 ABC9-43908500H18
Hschr6_1_ctg8
f9A43908500H18
AC212491.3
finished
106 RP1-197K23
Hschr6_1_ctg8
dJ197K23
AL035465.4
finished
107 RP11-103C16
Hschr6_1_ctg8
bA103C16
AL590006.4
finished
108 RP11-384A24
Hschr6_1_ctg8
bA384A24
AL451073.17
finished
109 RP1-67A5
Hschr6_1_ctg8
CONTAINER
dJ67A5
AL035594.7
finished
110
Hschr6_1_ctg8
CONTAINED
KF458278
KF458278.1
finished
109 RP1-67A5
Hschr6_1_ctg8
CONTAINER
dJ67A5
AL035594.7
finished
111
Hschr6_1_ctg8
CONTAINED
KF458282
KF458282.1
finished
109 RP1-67A5
Hschr6_1_ctg8
CONTAINER
dJ67A5
AL035594.7
finished
112 RP11-636H20
Hschr6_1_ctg8
bA636H20
AL357621.10
finished
113 RP1-86D1
Hschr6_1_ctg8
dJ86D1
AL034349.3
finished
  GAP (type-3) length unknown    
115 RP4-655C5
Hschr6_1_ctg9
dJ655C5
AL121956.21
finished
116 ABC7-43046200P7
Hschr6_1_ctg9
f7A43046200P7
AC233714.2
finished

AGP

Help

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 46315 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 AL662890.3 1 46315 +
46316 140376 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR759954.9 1 94061 +
140377 207798 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 3 CR759942.12 2001 69422 +
207799 252051 4 N 44253 contig yes # ALIGN GENUS
252052 327065 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 5 - 5 CR759957.2 1 75014 +
327066 356449 6 N 29384 contig yes # ALIGN GENUS
356450 397784 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 8 CR942175.3 1 41335 +
397785 448565 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 8 CR774181.3 2000 52780 +
448566 536163 9 N 87598 contig yes # ALIGN GENUS
536164 588752 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 10 - 10 CR936918.2 1 52589 +
588753 692944 11 N 104192 contig yes # ALIGN GENUS
692945 721471 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 15 CR848056.4 1 28527 +
721472 800551 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 15 CR759956.2 2001 81080 +
800552 878790 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 15 CR788300.6 670 78908 +
878791 944426 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 12 - 15 CR936483.10 1997 67632 +
944427 963549 16 N 19123 contig yes # ALIGN GENUS
963550 970031 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 17 - 17 CR762489.4 1 6482 +
970032 1029408 18 N 59377 contig yes # ALIGN GENUS
1029409 1141953 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 22 CR925767.6 1 112545 +
1141954 1142983 20 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 22 CU019528.1 661 1690 +
1142984 1165880 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 22 CT009496.3 90 22986 +
1165881 1229603 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 19 - 22 CR759913.4 4308 68030 +
1229604 1254197 23 N 24594 contig yes # ALIGN GENUS
1254198 1268513 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 24 - 25 CR759943.6 1 14316 +
1268514 1363620 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 24 - 25 CR759960.3 2001 97107 +
1363621 1373366 26 N 9746 contig yes # ALIGN GENUS
1373367 1396877 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 27 - 27 CR925727.3 1 23511 +
1396878 1399808 28 N 2931 contig yes # ALIGN GENUS
1399809 1478635 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 30 CR788282.3 1 78827 +
1478636 1507250 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 30 CT009520.5 2001 30615 +
1507251 1611841 31 N 104591 contig yes # ALIGN GENUS
1611842 1638218 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 32 - 32 CT009538.5 1 26377 +
1638219 1654658 33 N 16440 contig yes # ALIGN GENUS
1654659 1694421 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 34 - 36 CR759928.10 1 39763 +
1694422 1781845 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 34 - 36 CR759890.6 2001 89424 +
1781846 1792265 36 FClick to retrieve finished assembled sequence in green bar: rank(s) 34 - 36 CR774188.4 2001 12420 +
1792266 1842018 37 N 49753 contig yes # ALIGN GENUS
1842019 1889480 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 38 - 38 CR759912.6 1 47462 +
1889481 1993351 39 N 103871 contig yes # ALIGN GENUS
1993352 2065591 40 FClick to retrieve finished assembled sequence in green bar: rank(s) 40 - 40 CR759873.4 1 72240 +
2065592 2220149 41 N 154558 contig yes # ALIGN GENUS
2220150 2224671 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 42 - 42 CR936908.2 1 4522 +
2224672 2309838 43 N 85167 contig yes # ALIGN GENUS
2309839 2315462 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 CR759911.5 1 5624 +
2315463 2396300 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 CR759964.5 2001 82838 +
2396301 2407373 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 CT009481.4 2001 13073 +
2407374 2415643 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 44 - 47 CR762477.4 2001 10270 +
2415644 2816903 48 N 401260 contig yes # ALIGN GENUS
2816904 2855311 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 CR788288.6 1 38408 +
2855312 2877348 50 FClick to retrieve finished assembled sequence in green bar: rank(s) 49 - 50 CT009531.8 2001 24037 +
2877349 2914100 51 N 36752 contig yes # ALIGN GENUS
2914101 2930097 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 CR759886.7 1 15997 +
2930098 2950326 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 52 - 53 CR759905.4 1912 22140 +
2950327 3093151 54 N 142825 contig yes # ALIGN GENUS
3093152 3178642 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 55 - 55 CR759915.6 1 85491 +
3178643 3192149 56 N 13507 contig yes # ALIGN GENUS
3192150 3196920 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 58 CR942273.7 1 4771 +
3196921 3235992 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 57 - 58 CR936237.6 1835 40906 +
3235993 3410964 59 N 174972 contig yes # ALIGN GENUS
3410965 3425307 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 61 CR936919.4 1 14343 +
3425308 3425848 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 60 - 61 CT010586.5 1996 2536 +
3425849 3471115 62 N 45267 contig yes # ALIGN GENUS
3471116 3546735 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 63 - 63 CR812478.6 1 75620 +
3546736 3649770 64 N 103035 contig yes # ALIGN GENUS
3649771 3694336 65 FClick to retrieve finished assembled sequence in green bar: rank(s) 65 - 65 CT009614.5 1 44566 +
3694337 3697989 66 N 3653 contig yes # ALIGN GENUS
3697990 3752292 67 FClick to retrieve finished assembled sequence in green bar: rank(s) 67 - 67 CR759917.3 1 54303 +
3752293 3791863 68 N 39571 contig yes # ALIGN GENUS
3791864 3818539 69 FClick to retrieve finished assembled sequence in green bar: rank(s) 69 - 69 CR759919.3 1 26676 +
3818540 3821861 70 N 3322 contig yes # ALIGN GENUS
3821862 3846035 71 FClick to retrieve finished assembled sequence in green bar: rank(s) 71 - 71 CR788283.2 1 24174 +
3846036 4026271 72 N 180236 contig yes # ALIGN GENUS
4026272 4084674 73 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 CR936921.7 1 58403 +
4084675 4178228 74 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 CR762476.2 2001 95554 +
4178229 4276136 75 FClick to retrieve finished assembled sequence in green bar: rank(s) 73 - 75 CR936913.7 2001 99908 +
4276137 4329845 76 N 53709 contig yes # ALIGN GENUS
4329846 4416325 77 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 CR759904.5 1 86480 +
4416326 4445698 78 FClick to retrieve finished assembled sequence in green bar: rank(s) 77 - 78 CT009497.8 33831 63203 +
4445699 4653554 79 N 207856 contig yes # ALIGN GENUS
4653555 4677959 80 FClick to retrieve finished assembled sequence in green bar: rank(s) 80 - 80 CT009514.7 1 24405 +
4677960 4727959 81 N 50000 contig no
4727960 4794638 82 FClick to retrieve finished assembled sequence in green bar: rank(s) 82 - 84 AL078601.10 1 66679 +
4794639 4833989 83 FClick to retrieve finished assembled sequence in green bar: rank(s) 82 - 84 AC209234.3 1 39351 +
4833990 4852795 84 FClick to retrieve finished assembled sequence in green bar: rank(s) 82 - 84 AL078601.10 78199 97004 +
4852796 4902795 85 N 50000 contig no
4902796 4941658 86 FClick to retrieve finished assembled sequence in green bar: rank(s) 86 - 88 AL513210.32 1 38863 +
4941659 4980398 87 FClick to retrieve finished assembled sequence in green bar: rank(s) 86 - 88 AC225168.3 1 38740 +
4980399 5090619 88 FClick to retrieve finished assembled sequence in green bar: rank(s) 86 - 88 AL513210.32 47352 157572 +
5090620 5140619 89 N 50000 contig no
5140620 5220121 90 FClick to retrieve finished assembled sequence in green bar: rank(s) 90 - 92 AL354892.19 1 79502 +
5220122 5297697 91 FClick to retrieve finished assembled sequence in green bar: rank(s) 90 - 92 AL049612.11 2001 79576 +
5297698 5340155 92 FClick to retrieve finished assembled sequence in green bar: rank(s) 90 - 92 FP565795.1 1704 44161 +
5340156 5390155 93 N 50000 contig no
5390156 5483546 94 FClick to retrieve finished assembled sequence in green bar: rank(s) 94 - 96 AL078605.30 26173 119563 -
5483547 5523156 95 FClick to retrieve finished assembled sequence in green bar: rank(s) 94 - 96 AC239411.3 1 39610 +
5523157 5662037 96 FClick to retrieve finished assembled sequence in green bar: rank(s) 94 - 96 AL008628.1 1 138881 -
5662038 5712037 97 N 50000 contig no
5712038 5746881 98 FClick to retrieve finished assembled sequence in green bar: rank(s) 98 - 100 AL593854.6 1 34844 +
5746882 5788104 99 FClick to retrieve finished assembled sequence in green bar: rank(s) 98 - 100 AC231958.1 1 41223 +
5788105 5891724 100 FClick to retrieve finished assembled sequence in green bar: rank(s) 98 - 100 AL593854.6 63250 166869 +
5891725 5941724 101 N 50000 contig no
5941725 5997509 102 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 104 AL391500.13 1 55785 +
5997510 6038244 103 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 104 AC216138.3 1 40735 +
6038245 6119532 104 FClick to retrieve finished assembled sequence in green bar: rank(s) 102 - 104 AL391500.13 89933 171220 +
6119533 6169532 105 N 50000 contig no
6169533 6339668 106 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL356432.17 1 170136 +
6339669 6406084 107 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL365224.8 101 66516 +
6406085 6511452 108 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL035470.10 1 105368 -
6511453 6535669 109 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AC212491.3 14669 38885 +
6535670 6564118 110 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL035465.4 1 28449 -
6564119 6606707 111 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL590006.4 101 42689 +
6606708 6727815 112 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL451073.17 101 121208 +
6727816 6799463 113 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL035594.7 101 71748 +
6799464 6799758 114 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 KF458278.1 1 295 +
6799759 6811563 115 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL035594.7 72044 83848 +
6811564 6811834 116 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 KF458282.1 1 271 -
6811835 6832815 117 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL035594.7 84120 105100 +
6832816 6929508 118 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL357621.10 147 96839 +
6929509 7042012 119 FClick to retrieve finished assembled sequence in green bar: rank(s) 106 - 119 AL034349.3 101 112604 +
7042013 7092012 120 N 50000 contig no
7092013 7131547 121 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 122 AL121956.21 80199 119733 -
7131548 7167017 122 FClick to retrieve finished assembled sequence in green bar: rank(s) 121 - 122 AC233714.2 1 35470 +

Details

Component Sanger::HumPub::ChromoView failed to execute

Statistics

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Clone Summary

Number of gaps
36
Gap types
type-2
28
type-3
8
Total clones
80
Clone HTGS Phases
finished
80
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
342,105
Total finished length of fin clones w/ overlap
4,862,749
Total finished length of fin clones w/o overlap
4,520,644
Total overlap length of fin+unfin clones
342,105
Total finished length of fin+unfin clones w/ overlap
4,862,749
Total finished length of fin+unfin clones w/o overlap
4,520,644

Dovetails

# rank accession status length date
1 82 AL078601.10 unfinished 18,806 Mon, 25 May 2015 23:32
2 85 AL513210.32 unfinished 110,221 Mon, 25 May 2015 23:32
3 96 AL593854.6 unfinished 103,620 Mon, 25 May 2015 23:32
4 99 AL391500.13 unfinished 81,288 Mon, 25 May 2015 23:32
5 109 AL035594.7 unfinished 33,057 Mon, 25 May 2015 23:32
6 115 AL121956.21 unfinished 54,332 Mon, 25 May 2015 23:32

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* quick link - http://q.sanger.ac.uk/3xrpcs73