ChromoView - clone / Assembly sequencing status

Human: Sub region GRC__HUMAN__ALT_REF_LOCI_1__21 (TPF updated: 2014-04-16)

TPF

# Clone ext/Contig Clone int Acc/Fin
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
AF130247.2
finished
2 ABC24-1849L17
Hschr21_1_ctg1_1
CONTAINED
f24A1849L17
AC238684.2
finished
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
AF130247.2
finished
3
Hschr21_1_ctg1_1
CONTAINED
KF456998
KF456998.1
finished
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
AF130247.2
finished
  GAP (type-3) length unknown    
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
AP000705.2
finished
6
Hschr21_2_ctg1_1
CONTAINED
KF510509
KF510509.1
finished
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
AP000705.2
finished
7
Hschr21_2_ctg1_1
CONTAINED
KF457091
KF457091.1
finished
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
AP000705.2
finished
8
Hschr21_2_ctg1_1
CONTAINED
KF511346
KF511346.1
finished
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
AP000705.2
finished
9
Hschr21_2_ctg1_1
CONTAINED
KF510504
KF510504.1
finished
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
AP000705.2
finished
10 ABC10-43666900A3
Hschr21_2_ctg1_1
f10A43666900A3
AC203635.2
finished
11 RP11-662K22
Hschr21_2_ctg1_1
CONTAINER
bA662K22
EPN details
AP000657.3
finished
12
Hschr21_2_ctg1_1
CONTAINED
KF457090
KF457090.1
finished
11 RP11-662K22
Hschr21_2_ctg1_1
CONTAINER
bA662K22
EPN details
AP000657.3
finished
  GAP (type-3) length unknown    
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
AP000280.3
finished
15
Hschr21_3_ctg1_1
CONTAINED
KF459715
KF459715.1
finished
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
AP000280.3
finished
16
Hschr21_3_ctg1_1
CONTAINED
KF511381
KF511381.1
finished
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
AP000280.3
finished
17 ABC10-45527300K20
Hschr21_3_ctg1_1
CONTAINED
f10A45527300K20
AC203640.2
finished
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
AP000280.3
finished
  GAP (type-3) length unknown    
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
AP000300.1
finished
20
Hschr21_4_ctg1_1
CONTAINED
KF457222
KF457222.1
finished
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
AP000300.1
finished
21
Hschr21_4_ctg1_1
CONTAINED
KF510547
KF510547.1
finished
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
AP000300.1
finished
22 ABC9-43837900D12
Hschr21_4_ctg1_1
f9A43837900D12
AC207981.3
finished
23 CMP21-4G8
Hschr21_4_ctg1_1
cmp21E4G8
AP000302.1
finished
  GAP (type-3) length unknown    
25
Hschr21_5_ctg2
AP001475
AP001475.1
finished
26 ABC12-49051600I19
Hschr21_5_ctg2
f12A49051600I19
AC226155.3
finished
27
Hschr21_5_ctg2
AP001468
AP001468.1
finished
  GAP (type-3) length unknown    
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
AP000432.4
finished
30
Hschr21_6_ctg1_1
CONTAINED
KF457038
KF457038.1
finished
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
AP000432.4
finished
31
Hschr21_6_ctg1_1
CONTAINED
KC877791
KC877791.1
finished
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
AP000432.4
finished
32
Hschr21_6_ctg1_1
CONTAINED
KC877788
KC877788.1
finished
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
AP000432.4
finished
33 ABC9-43863900H3
Hschr21_6_ctg1_1
CONTAINED
f9A43863900H3
AC208585.5
finished
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
AP000432.4
finished
  GAP (type-3) length unknown    
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
36
Hschr21_8_ctg1_1
CONTAINED
KF457030
KF457030.1
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
37
Hschr21_8_ctg1_1
CONTAINED
KF457028
KF457028.1
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
38 ABC14-50175200C15
Hschr21_8_ctg1_1
CONTAINED
f14A50175200C15
AC226180.3
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
39
Hschr21_8_ctg1_1
CONTAINED
KF510489
KF510489.1
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
40
Hschr21_8_ctg1_1
CONTAINED
KC877783
KC877783.1
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished
41
Hschr21_8_ctg1_1
CONTAINED
KC877795
KC877795.1
finished
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
AP000457.3
finished

AGP

AGP_S AGP_E Rank Status Acc.ver Clone_S Clone_E Str
1 122 1 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AF130247.2 1 122 +
123 40419 2 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AC238684.2 1 40297 -
40420 57525 3 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AF130247.2 27834 44939 +
57526 57815 4 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 KF456998.1 1 290 +
57816 101455 5 FClick to retrieve finished assembled sequence in green bar: rank(s) 1 - 5 AF130247.2 45230 88869 +
101456 151455 6 N 50000 contig no
151456 178955 7 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000705.2 1 27500 +
178956 179336 8 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 KF510509.1 1 381 +
179337 183296 9 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000705.2 27883 31842 +
183297 183355 10 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 KF457091.1 1 59 -
183356 211141 11 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000705.2 31902 59687 +
211142 211527 12 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 KF511346.1 1 386 +
211528 277485 13 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000705.2 60073 126030 +
277486 277872 14 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 KF510504.1 1 387 +
277873 278343 15 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000705.2 126419 126889 +
278344 314947 16 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AC203635.2 1 36604 -
314948 322387 17 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000657.3 11946 19385 +
322388 322636 18 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 KF457090.1 1 249 +
322637 354623 19 FClick to retrieve finished assembled sequence in green bar: rank(s) 7 - 19 AP000657.3 19635 51621 +
354624 404623 20 N 50000 contig no
404624 434057 21 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 AP000280.3 1 29434 +
434058 434410 22 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 KF459715.1 1 353 +
434411 434828 23 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 AP000280.3 29788 30205 +
434829 435200 24 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 KF511381.1 1 372 +
435201 446799 25 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 AP000280.3 30577 42175 +
446800 483737 26 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 AC203640.2 1 36938 +
483738 484105 27 FClick to retrieve finished assembled sequence in green bar: rank(s) 21 - 27 AP000280.3 73320 73687 +
484106 534105 28 N 50000 contig no
534106 535390 29 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 AP000300.1 1 1285 +
535391 535444 30 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 KF457222.1 1 54 +
535445 542926 31 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 AP000300.1 1340 8821 +
542927 543288 32 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 KF510547.1 1 362 +
543289 588874 33 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 AP000300.1 9185 54770 +
588875 628497 34 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 AC207981.3 1 39623 -
628498 651441 35 FClick to retrieve finished assembled sequence in green bar: rank(s) 29 - 35 AP000302.1 12179 35122 +
651442 701441 36 N 50000 contig no
701442 715138 37 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 AP001475.1 1 13697 +
715139 743225 38 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 AC226155.3 9736 37822 +
743226 784612 39 FClick to retrieve finished assembled sequence in green bar: rank(s) 37 - 39 AP001468.1 25946 67332 +
784613 834612 40 N 50000 contig no
834613 849881 41 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AP000432.4 1 15269 +
849882 850271 42 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 KF457038.1 1 390 -
850272 851790 43 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AP000432.4 15660 17178 +
851791 852340 44 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 KC877791.1 1 550 -
852341 923050 45 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AP000432.4 17729 88438 +
923051 923350 46 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 KC877788.1 1 300 -
923351 941180 47 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AP000432.4 88739 106568 +
941181 976401 48 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AC208585.5 1 35221 -
976402 979978 49 FClick to retrieve finished assembled sequence in green bar: rank(s) 41 - 49 AP000432.4 138256 141832 +
979979 1029978 50 N 50000 contig no
1029979 1045647 51 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 1 15669 +
1045648 1045977 52 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 KF457030.1 1 330 +
1045978 1096339 53 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 16000 66361 +
1096340 1096719 54 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 KF457028.1 1 380 +
1096720 1104477 55 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 66742 74499 +
1104478 1141878 56 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AC226180.3 1 37401 -
1141879 1152397 57 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 108699 119217 +
1152398 1152795 58 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 KF510489.1 1 398 +
1152796 1153161 59 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 119617 119982 +
1153162 1153752 60 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 KC877783.1 1 591 +
1153753 1166288 61 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 120574 133109 +
1166289 1166652 62 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 KC877795.1 1 364 -
1166653 1198400 63 FClick to retrieve finished assembled sequence in green bar: rank(s) 51 - 63 AP000457.3 133474 165221 +

Details

# Clone ext/Contig Clone int Status/Date Acc/Fin Length Library OL Pos OL Qual OL details Cert
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
-
-
AF130247.2
finished
88869 RPCI-1 3' / 3'
122 / 40297
61036 / -
40297
45.7
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
2 ABC24-1849L17
Hschr21_1_ctg1_1
CONTAINED
f24A1849L17
-
-
AC238684.2
finished
40297 ABC24 5' / 5'
1 / 27834
- / 122
40297
45.7
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
-
-
AF130247.2
finished
88869 RPCI-1 3' / 5'
44939 / 1
43640 / -
290
0.34
Identified
2014-04-09
fetch_ncbi...
humpub
 
3
Hschr21_1_ctg1_1
CONTAINED
KF456998
-
-
KF456998.1
finished
290 - 3' / 5'
290 / 45230
- / 44939
290
0.34
Identified
2014-04-09
fetch_ncbi...
humpub
 
1 RP1-31B5
Hschr21_1_ctg1_1
CONTAINER
dJ31B5
-
-
AF130247.2
finished
88869 RPCI-1        
  GAP (type-3) length unknown                  
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
-
-
AP000705.2
finished
145869 RPCI-11.3 3' / 5'
27500 / 1
117987 / -
381
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
6
Hschr21_2_ctg1_1
CONTAINED
KF510509
-
-
KF510509.1
finished
381 - 3' / 5'
381 / 27883
- / 27500
381
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
-
-
AP000705.2
finished
145869 RPCI-11.3 3' / 3'
31842 / 59
113968 / -
59
1.69
Identified
2014-04-09
fetch_ncbi...
humpub
 
7
Hschr21_2_ctg1_1
CONTAINED
KF457091
-
-
KF457091.1
finished
59 - 5' / 5'
1 / 31902
- / 31842
59
1.69
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
-
-
AP000705.2
finished
145869 RPCI-11.3 3' / 5'
59687 / 1
85797 / -
386
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
8
Hschr21_2_ctg1_1
CONTAINED
KF511346
-
-
KF511346.1
finished
386 - 3' / 5'
386 / 60073
- / 59687
386
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
-
-
AP000705.2
finished
145869 RPCI-11.3 3' / 5'
126030 / 1
19451 / -
387
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
9
Hschr21_2_ctg1_1
CONTAINED
KF510504
-
-
KF510504.1
finished
387 - 3' / 5'
387 / 126419
- / 126030
387
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
5 RP11-745D19
Hschr21_2_ctg1_1
CONTAINER
bA745D19
-
-
AP000705.2
finished
145869 RPCI-11.3 3' / 3'
126889 / 36604
- / -
18969
0.55
Identified
2014-04-09
fetch_ncbi...
humpub
 
10 ABC10-43666900A3
Hschr21_2_ctg1_1
f10A43666900A3
-
-
AC203635.2
finished
36604 ABC10 5' / 5'
1 / 11946
- / -
11940
55.97
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
11 RP11-662K22
Hschr21_2_ctg1_1
CONTAINER
bA662K22
EPN details
Externally Finished
09-DEC-10
AP000657.3
finished
51621 RPCI-11.3 3' / 5'
19385 / 1
31987 / -
249
0.4
Identified
2014-04-09
fetch_ncbi...
humpub
 
12
Hschr21_2_ctg1_1
CONTAINED
KF457090
-
-
KF457090.1
finished
249 - 3' / 5'
249 / 19635
- / 19385
249
0.4
Identified
2014-04-09
fetch_ncbi...
humpub
 
11 RP11-662K22
Hschr21_2_ctg1_1
CONTAINER
bA662K22
EPN details
Externally Finished
09-DEC-10
AP000657.3
finished
51621 RPCI-11.3        
  GAP (type-3) length unknown                  
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
-
-
AP000280.3
finished
73687 CMP21 3' / 5'
29434 / 1
43900 / -
353
0.28
Identified
2014-04-09
fetch_ncbi...
humpub
 
15
Hschr21_3_ctg1_1
CONTAINED
KF459715
-
-
KF459715.1
finished
353 - 3' / 5'
353 / 29788
- / 29434
353
0.28
Identified
2014-04-09
fetch_ncbi...
humpub
 
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
-
-
AP000280.3
finished
73687 CMP21 3' / 5'
30205 / 1
43111 / -
372
0.27
Identified
2014-04-09
fetch_ncbi...
humpub
 
16
Hschr21_3_ctg1_1
CONTAINED
KF511381
-
-
KF511381.1
finished
372 - 3' / 5'
372 / 30577
- / 30205
372
0.27
Identified
2014-04-09
fetch_ncbi...
humpub
 
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
-
-
AP000280.3
finished
73687 CMP21 3' / 5'
42175 / 1
368 / -
36938
18.83
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
17 ABC10-45527300K20
Hschr21_3_ctg1_1
CONTAINED
f10A45527300K20
-
-
AC203640.2
finished
36938 ABC10 3' / 5'
36938 / 73320
- / 42175
36938
18.83
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
14 CMP21-S12
Hschr21_3_ctg1_1
CONTAINER
cmp21ES12
-
-
AP000280.3
finished
73687 CMP21        
  GAP (type-3) length unknown                  
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
-
-
AP000300.1
finished
56188 RPCI-1 3' / 5'
1285 / 1
54849 / -
54
1.85
Identified
2014-04-09
fetch_ncbi...
humpub
 
20
Hschr21_4_ctg1_1
CONTAINED
KF457222
-
-
KF457222.1
finished
54 - 3' / 5'
54 / 1340
- / 1285
54
1.85
Identified
2014-04-09
fetch_ncbi...
humpub
 
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
-
-
AP000300.1
finished
56188 RPCI-1 3' / 5'
8821 / 1
47004 / -
362
0.28
Identified
2014-04-09
fetch_ncbi...
humpub
 
21
Hschr21_4_ctg1_1
CONTAINED
KF510547
-
-
KF510547.1
finished
362 - 3' / 5'
362 / 9185
- / 8821
362
0.28
Identified
2014-04-09
fetch_ncbi...
humpub
 
19 RP1-PACB5
Hschr21_4_ctg1_1
CONTAINER
dJPACB5
-
-
AP000300.1
finished
56188 RPCI-1 3' / 3'
54770 / 39623
- / -
1418
0.07
Identified
2014-04-09
fetch_ncbi...
humpub
 
22 ABC9-43837900D12
Hschr21_4_ctg1_1
f9A43837900D12
-
-
AC207981.3
finished
39623 ABC9 5' / 5'
1 / 12179
- / -
12178
0.03
Identified
2014-04-09
fetch_ncbi...
humpub
 
23 CMP21-4G8
Hschr21_4_ctg1_1
cmp21E4G8
-
-
AP000302.1
finished
35122 CMP21        
  GAP (type-3) length unknown                  
25
Hschr21_5_ctg2
AP001475
-
-
AP001475.1
finished
13697 - 3' / 5'
13697 / 9736
- / -
9483
2.88
Identified
2014-04-09
fetch_ncbi...
humpub
 
26 ABC12-49051600I19
Hschr21_5_ctg2
f12A49051600I19
-
-
AC226155.3
finished
37822 ABC12 3' / 5'
37822 / 25946
- / -
25938
9.41
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
27
Hschr21_5_ctg2
AP001468
-
-
AP001468.1
finished
67332 -        
  GAP (type-3) length unknown                  
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
-
-
AP000432.4
finished
141832 - 3' / 3'
15269 / 390
126173 / -
390
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
30
Hschr21_6_ctg1_1
CONTAINED
KF457038
-
-
KF457038.1
finished
390 - 5' / 5'
1 / 15660
- / 15269
390
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
-
-
AP000432.4
finished
141832 - 3' / 3'
17178 / 550
124104 / -
550
0.18
Identified
2014-04-09
fetch_ncbi...
humpub
 
31
Hschr21_6_ctg1_1
CONTAINED
KC877791
-
-
KC877791.1
finished
550 - 5' / 5'
1 / 17729
- / 17178
550
0.18
Identified
2014-04-09
fetch_ncbi...
humpub
 
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
-
-
AP000432.4
finished
141832 - 3' / 3'
88438 / 300
53094 / -
300
0.33
Identified
2014-04-09
fetch_ncbi...
humpub
 
32
Hschr21_6_ctg1_1
CONTAINED
KC877788
-
-
KC877788.1
finished
300 - 5' / 5'
1 / 88739
- / 88438
300
0.33
Identified
2014-04-09
fetch_ncbi...
humpub
 
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
-
-
AP000432.4
finished
141832 - 3' / 3'
106568 / 35221
3577 / -
35221
14.34
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
33 ABC9-43863900H3
Hschr21_6_ctg1_1
CONTAINED
f9A43863900H3
-
-
AC208585.5
finished
35221 ABC9 5' / 5'
1 / 138256
- / 106568
35221
14.34
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
29
Hschr21_6_ctg1_1
CONTAINER
AP000432
-
-
AP000432.4
finished
141832 -        
  GAP (type-3) length unknown                  
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 5'
15669 / 1
149222 / -
330
0.3
Identified
2014-04-09
fetch_ncbi...
humpub
 
36
Hschr21_8_ctg1_1
CONTAINED
KF457030
-
-
KF457030.1
finished
330 - 3' / 5'
330 / 16000
- / 15669
330
0.3
Identified
2014-04-09
fetch_ncbi...
humpub
 
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 5'
66361 / 1
98480 / -
380
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
37
Hschr21_8_ctg1_1
CONTAINED
KF457028
-
-
KF457028.1
finished
380 - 3' / 5'
380 / 66742
- / 66361
380
0.26
Identified
2014-04-09
fetch_ncbi...
humpub
 
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 3'
74499 / 37401
56523 / -
37401
9.63
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
38 ABC14-50175200C15
Hschr21_8_ctg1_1
CONTAINED
f14A50175200C15
-
-
AC226180.3
finished
37401 ABC14 5' / 5'
1 / 108699
- / 74499
37401
9.63
Identified
2014-04-09
fetch_ncbi...
humpub
Certificate approved
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 5'
119217 / 1
45605 / -
398
0.25
Identified
2014-04-09
fetch_ncbi...
humpub
 
39
Hschr21_8_ctg1_1
CONTAINED
KF510489
-
-
KF510489.1
finished
398 - 3' / 5'
398 / 119617
- / 119217
398
0.25
Identified
2014-04-09
fetch_ncbi...
humpub
 
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 5'
119982 / 1
44648 / -
591
0.17
Identified
2014-04-09
fetch_ncbi...
humpub
 
40
Hschr21_8_ctg1_1
CONTAINED
KC877783
-
-
KC877783.1
finished
591 - 3' / 5'
591 / 120574
- / 119982
591
0.17
Identified
2014-04-09
fetch_ncbi...
humpub
 
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 - 3' / 3'
133109 / 364
31748 / -
364
0.27
Identified
2014-04-09
fetch_ncbi...
humpub
 
41
Hschr21_8_ctg1_1
CONTAINED
KC877795
-
-
KC877795.1
finished
364 - 5' / 5'
1 / 133474
- / 133109
364
0.27
Identified
2014-04-09
fetch_ncbi...
humpub
 
35
Hschr21_8_ctg1_1
CONTAINER
AP000457
-
-
AP000457.3
finished
165221 -        

Statistics

Clone Summary

Number of gaps
6
Gap types
type-3
6
Total clones
35
Clone HTGS Phases
finished
35
Number of clones w/o accession
0

Overlap Summary

Total overlap length of fin clones
88,986
Total finished length of fin clones w/ overlap
1,109,540
Total finished length of fin clones w/o overlap
1,020,554
Total overlap length of fin+unfin clones
88,986
Total finished length of fin+unfin clones w/ overlap
1,109,540
Total finished length of fin+unfin clones w/o overlap
1,020,554

Dovetails

# rank accession status length date
1 1 AF130247.2 unfinished 61,036 Tue, 15 Apr 2014 23:30
2 5 AP000705.2 unfinished 117,987 Tue, 15 Apr 2014 23:30
3 11 AP000657.3 unfinished 31,987 Tue, 15 Apr 2014 23:30
4 14 AP000280.3 unfinished 43,900 Tue, 15 Apr 2014 23:30
5 19 AP000300.1 unfinished 54,849 Tue, 15 Apr 2014 23:30
6 29 AP000432.4 unfinished 126,173 Tue, 15 Apr 2014 23:30
7 35 AP000457.3 unfinished 149,222 Tue, 15 Apr 2014 23:30

Search

Search Project, Accession or International clone name:

Select region

Other links

* quick link - http://q.sanger.ac.uk/oa7ju76d