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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'S'

Saraf

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Saraf was found for the following reasons:
marker_name - store-operated calcium entry-associated regulatory factor
symbol - Saraf
marker_symbol_str - Saraf
marker_symbol - Saraf

Gene Details

Marker Name(s): store-operated calcium entry-associated regulatory factor
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 1810045K07Rik, Tmem66
Location: Chr8:34154563-34170845(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1915137 Ensembl Gene ID: ENSMUSG00000031532 Vega Gene ID:
Entrez Gene ID: 67887 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human SARAF 51669
Rat Saraf 290796

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 80359)
order order view details

ES Cell Clones

Cassette Type 3 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0863_5_B11 HTGRS6006_A_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2a(KOMP)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) fail Vector Integrity fail
Distribution Centre
Karyotype - Copy Number fail Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0863_5_B12 HTGRS6006_A_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2a(KOMP)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0863_5_H09 HTGRS6006_A_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2a(KOMP)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0863_5_F11 HTGRS6006_A_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen no reads detected LoxP Screen no reads detected 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
51100 HTGRS6006_A_A08 PCS6006_A_A08 L1L2_Bact_P L3L4_pD223_DTA_spec view
51100 HTGRS6006_A_A08 PCS6006_A_A08 L1L2_Bact_P L3L4_pD223_DTA_spec view
Vectors ES Cells
KOMP-CSD
(Project: 79400)
order order view details

ES Cell Clones

Cassette Type 1 Knockout-First Alleles 2 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0613_2_B07 HTGRS6006_B_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype 0.8 - 0.71 Copy Number pass Cells Thawed Correctly -
5' LR-PCR pass 5' SR-PCR - 3' SR-PCR pass
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0613_2_D08 HTGRS6006_B_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) pass Vector Integrity pass
Distribution Centre
Karyotype - Copy Number pass Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0613_2_G07 HTGRS6006_B_A08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) pass Vector Integrity pass
Distribution Centre
Karyotype 0.5 - 0.41 Copy Number pass Cells Thawed Correctly -
5' LR-PCR pass 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
51100 HTGRS6006_B_A08 PCS6006_B_A08 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view
51100 HTGRS6006_B_A08 PCS6006_B_A08 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view

DNA Clone Resources no data available

Sardh

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sardh was found for the following reasons:
marker_name - sarcosine dehydrogenase
symbol - Sardh
marker_symbol_str - Sardh
marker_symbol - Sardh

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
45 9 3 0 view in Ensembl

Sardhos

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sardhos was found for the following reasons:
marker_name - sarcosine dehydrogenase, opposite strand
symbol - Sardhos
marker_symbol_str - Sardhos
marker_symbol - Sardhos

Gene Details

Marker Name(s): sarcosine dehydrogenase, opposite strand
view this gene in MGI
Marker Type: unclassified gene
Synonyms: Gm17071
Location: Chr2:27189382-27234710(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:4937898 Ensembl Gene ID: ENSMUSG00000091192 Vega Gene ID: OTTMUSG00000035863
Entrez Gene ID: CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Sarm1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sarm1 was found for the following reasons:
marker_name - sterile alpha and HEAT/Armadillo motif containing 1
symbol - Sarm1
interpro_desc - SAM/pointed
marker_symbol_str - Sarm1
marker_symbol - Sarm1
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Sarnp

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sarnp was found for the following reasons:
marker_name - SAP domain containing ribonucleoprotein
symbol - Sarnp
interpro_desc - SAP_dom
marker_symbol_str - Sarnp
marker_symbol - Sarnp
interpro - IPR003034||SAP_dom||SAP domain

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Sars

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sars was found for the following reasons:
synonym - Strs
marker_name - seryl-aminoacyl-tRNA synthetase
symbol - Sars
interpro_desc - Ser-tRNA-synth_1_N
marker_symbol_str - Sars
marker_symbol - Sars
interpro - IPR015866||Ser-tRNA-synth_1_N||Serine-tRNA synthetase, type1, N-terminal

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
24 13 0 0 view in Ensembl

Sars2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sars2 was found for the following reasons:
marker_name - seryl-aminoacyl-tRNA synthetase 2
symbol - Sars2
interpro_desc - Ser-tRNA-synth_1_N
marker_symbol_str - Sars2
marker_symbol - Sars2
interpro - IPR015866||Ser-tRNA-synth_1_N||Serine-tRNA synthetase, type1, N-terminal

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
12 6 1 0 view in Ensembl

Sart1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sart1 was found for the following reasons:
marker_name - squamous cell carcinoma antigen recognized by T cells 1
symbol - Sart1
interpro_desc - SART_1
marker_symbol_str - Sart1
marker_symbol - Sart1
interpro - IPR005011||SART_1||SART-1 protein

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
29 6 0 0 view in Ensembl

Sart3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sart3 was found for the following reasons:
marker_name - squamous cell carcinoma antigen recognized by T cells 3
symbol - Sart3
marker_symbol_str - Sart3
marker_symbol - Sart3

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
12 2 2 0 view in Ensembl

Sas2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sas2 was found for the following reasons:
synonym - Sas-2
marker_name - serum antigenic substance 2
symbol - Sas2
marker_symbol_str - Sas2
marker_symbol - Sas2

Gene Details

Marker Name(s): serum antigenic substance 2
view this gene in MGI
Marker Type: heritable phenotypic marker
Synonyms: Sas-2
Location: Chr1
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:98232 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 110055 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available