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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'S'

Samd8

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samd8 was found for the following reasons:
colony_prefix - Samd8
marker_name - sterile alpha motif domain containing 8
symbol - Samd8
interpro_desc - SAM/pointed
marker_symbol_str - Samd8
marker_symbol - Samd8
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 4 1 0 view in Ensembl

Samd9l

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samd9l was found for the following reasons:
marker_name - sterile alpha motif domain containing 9-like
symbol - Samd9l
interpro_desc - SAM_Ste50p
marker_symbol_str - Samd9l
marker_symbol - Samd9l
interpro - IPR015316||SAM_Ste50p||Sterile alpha motif, Ste50p

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
34 7 0 0 view in Ensembl

Samhd1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samhd1 was found for the following reasons:
colony_prefix - Samhd1
marker_name - SAM domain and HD domain, 1
symbol - Samhd1
interpro_desc - SAM/pointed
marker_symbol_str - Samhd1
marker_symbol - Samhd1
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
34 5 0 0 view in Ensembl

Samm50

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samm50 was found for the following reasons:
marker_name - sorting and assembly machinery component 50 homolog (S. cerevisiae)
symbol - Samm50
interpro_desc - Bac_surfAg_D15
marker_symbol_str - Samm50
marker_symbol - Samm50
interpro - IPR000184||Bac_surfAg_D15||Bacterial surface antigen (D15)

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
37 8 0 0 view in Ensembl

Samsn1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samsn1 was found for the following reasons:
marker_name - SAM domain, SH3 domain and nuclear localization signals, 1
symbol - Samsn1
interpro_desc - SAM/SH3 domain-containing
marker_symbol_str - Samsn1
marker_symbol - Samsn1
interpro - IPR013761||SAM/pointed||Sterile alpha motif/pointed domain

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
32 7 5 0 view in Ensembl

Samt1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samt1 was found for the following reasons:
marker_name - spermatogenesis associated multipass transmembrane protein 1
symbol - Samt1
marker_symbol_str - Samt1
marker_symbol - Samt1

Gene Details

Marker Name(s): spermatogenesis associated multipass transmembrane protein 1
view this gene in MGI
Marker Type: protein coding gene
Synonyms: Gm15144, OTTMUSG00000019268
Location: ChrX:154001590-154012640(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3709338 Ensembl Gene ID: ENSMUSG00000094802 Vega Gene ID: OTTMUSG00000019268
Entrez Gene ID: 78092 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Rat LOC685789 685789

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

Samt2

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samt2 was found for the following reasons:
marker_name - spermatogenesis associated multipass transmembrane protein 2
symbol - Samt2
marker_symbol_str - Samt2
marker_symbol - Samt2

Gene Details

Marker Name(s): spermatogenesis associated multipass transmembrane protein 2
view this gene in MGI
Marker Type: protein coding gene
Synonyms: EG434881, Gm5647
Location: ChrX:154575228-154579360(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3646587 Ensembl Gene ID: ENSMUSG00000072888 Vega Gene ID: OTTMUSG00000019262
Entrez Gene ID: 434881 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Rat LOC685762 685762

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

Samt3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samt3 was found for the following reasons:
marker_name - spermatogenesis associated multipass transmembrane protein 3
symbol - Samt3
marker_symbol_str - Samt3
marker_symbol - Samt3

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Samt4

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Samt4 was found for the following reasons:
marker_name - spermatogenesis associated multipass transmembrane protein 4
symbol - Samt4
marker_symbol_str - Samt4
marker_symbol - Samt4

Gene Details

Marker Name(s): spermatogenesis associated multipass transmembrane protein 4
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 4930542N07Rik
Location: ChrX:154482002-154484682(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922435 Ensembl Gene ID: ENSMUSG00000025051 Vega Gene ID: OTTMUSG00000019283
Entrez Gene ID: 75185 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Rat Samt4 685774

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Sap130

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Sap130 was found for the following reasons:
marker_name - Sin3A associated protein
symbol - Sap130
marker_symbol_str - Sap130
marker_symbol - Sap130
mp_ontology - T cell morphology | decreased T cell number | abnormal single-positive T cell number | abnormal alpha
mp_term - abnormal single-positive T cell number

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Sap130tm1a(KOMP)Mbp MGBF view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Sap130tm1a(KOMP)Mbp MGBF view view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
30 10 2 0 view in Ensembl