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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Marker Symbol: 'C'

Cyp2j6

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2j6 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD ES Cell Generated
ccds_id - CCDS18369.1
marker_name - cytochrome P450, family 2, subfamily j, polypeptide 6
symbol - Cyp2j6
interpro_desc - Cyt_P450_E_grp-I_CYP2J-like
marker_symbol_str - Cyp2j6
escell - EPD0851_3_C11
marker_symbol - Cyp2j6
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR008071||Cyt_P450_E_grp-I_CYP2J-like||Cytochrome P450, E-class, group I, CYP2J-like
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
30 7 2 0 view in Ensembl

Cyp2j7

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2j7 was found for the following reasons:
synonym - Cyp2j7-ps
marker_name - cytochrome P450, family 2, subfamily j, polypeptide 7
symbol - Cyp2j7
interpro_desc - Cyt_P450_E_grp-I_CYP2J-like
marker_symbol_str - Cyp2j7
marker_symbol - Cyp2j7
marker_type - protein coding gene
interpro - IPR008071||Cyt_P450_E_grp-I_CYP2J-like||Cytochrome P450, E-class, group I, CYP2J-like

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Cyp2j8

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2j8 was found for the following reasons:
synonym - Cyp2j8-ps
marker_name - cytochrome P450, family 2, subfamily j, polypeptide 8
symbol - Cyp2j8
interpro_desc - Cyt_P450_E_grp-I_CYP2J-like
marker_symbol_str - Cyp2j8
marker_symbol - Cyp2j8
marker_type - protein coding gene
interpro - IPR008071||Cyt_P450_E_grp-I_CYP2J-like||Cytochrome P450, E-class, group I, CYP2J-like

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Cyp2j9

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2j9 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD ES Cell Generated
ccds_id - CCDS18370.1
marker_name - cytochrome P450, family 2, subfamily j, polypeptide 9
symbol - Cyp2j9
interpro_desc - Cyt_P450_E_grp-I_CYP2J-like
targeting_vector - PG00021_C_1_A05
marker_symbol_str - Cyp2j9
escell - EPD0195_4_C10
marker_symbol - Cyp2j9
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR008071||Cyt_P450_E_grp-I_CYP2J-like||Cytochrome P450, E-class, group I, CYP2J-like
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
34 6 1 0 view in Ensembl

Cyp2r1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2r1 was found for the following reasons:
ikmc_project_product_status - EUCOMM ES Cell Generated
ccds_id - CCDS21761.1
marker_name - cytochrome P450, family 2, subfamily r, polypeptide 1
symbol - Cyp2r1
interpro_desc - Cyt_P450
marker_symbol_str - Cyp2r1
escell - EPD0559_1_C06
marker_symbol - Cyp2r1
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR002401||Cyt_P450_E_grp-I||Cytochrome P450, E-class, group I
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping

MP Ontology Based Heatmap
Allele Name Colony Prefix Colony Strain adipose tissue behavior/neurological cardiovascular system cellular craniofacial digestive/alimentary embryogenesis endocrine/exocrine gland growth/size hearing/vestibular/ear hematopoietic system homeostasis/metabolism immune system integument limbs/digits/tail liver/biliary system mortality/aging muscle nervous system other pigmentation renal/urinary system reproductive system respiratory system skeleton taste/olfaction tumorigenesis vision/eye
Cyp2r1 MUBS view view view view view view view view view view view view view view view view view view
Legend: No Raw Data No Significant Annotations Significant Annotation Present Link to a Test Report Page Link to a test report page
About This Heatmap

This heatmap is built up of top-level terms from the MP (Mammalian Phenotype) ontology. We have mapped a majority of the parameters in our tests to appropriate MP terms, so when we perform a given test we can say if it should be annotated with the given MP term (if the phenotype is significant). This is what you see in this heatmap - if a significant result has been annotated to a top-level MP term (or any of its children), the cell will be red, if the result was not significant, the cell will be blue.

Please Note: as mentioned above we do not annotate all of our phenotyping tests to the MP ontology. The tests that are excluded are: 'Adult LacZ Expression', 'Brain/Eye/Skin Histopathology', 'Embryo LacZ Expression', 'Fertility', 'Heart Histology', 'Micronuclei', 'MicroCT & Quantitative Faxitron', 'Plasma Immunoglobulins', 'Prepulse Inhibition', 'Recessive Lethal Study', 'Tail Epidermis Wholemount', 'Tissue Biobank' and 'Viability at Weaning'. You can find our results for these tests in the 'Phenotyping Test Based Heatmap' below.

Phenotyping Test Based Heatmap
Allele Name Colony Prefix Colony Strain Viability at weaning Recessive Lethal Study Fertility Embryo LacZ Expression Adult LacZ Expression General Observations Weight Curves Open Field Modified SHIRPA Grip Strength Hot Plate Dysmorphology Rotarod Non-Invasive Blood Pressure Prepulse Inhibition Indirect Calorimetry Glucose Tolerance (ip) Auditory Brainstem Response Body Composition (DEXA) X-ray Imaging Stress Induced Hyperthermia Eye Morphology Plasma Chemistry Plasma Immunoglobulins Haematology (CBC) Peripheral Blood Lymphocytes Micronuclei Tissue Biobank Heart Weight Heart Histology Tail Epidermis Wholemount Skin Histopathology Brain Histopathology Eye Histopathology MicroCT & Quantitative Faxitron Salmonella Challenge Citrobacter Challenge
Cyp2r1 MUBS view view view view view view view view view view view view view view view view view
download a spreadsheet containing all WTSI phenotyping data
Legend - hover over each heading to get a more complete description
Test complete and data/resources are available Test is complete and the data are considered interesting Preliminary indication of an interesting phenotype
Test is complete but the data are not considered interesting Test not performed or applicable Test pending
Test abandoned Link to a Test Report Page Link to a test report page Link to a PDF Report Link to a pdf report

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 7 1 0 view in Ensembl

Cyp2s1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2s1 was found for the following reasons:
synonym - C79779
ikmc_project_product_status - EUCOMM ES Cell Generated
ccds_id - CCDS20997.1
marker_name - cytochrome P450, family 2, subfamily s, polypeptide 1
symbol - Cyp2s1
interpro_desc - Cyt_P450_E_grp-I_CYP2A-like
marker_symbol_str - Cyp2s1
escell - EPD0554_6_C03
marker_symbol - Cyp2s1
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR008067||Cyt_P450_E_grp-I_CYP2A-like||Cytochrome P450, E-class, group I, CYP2A-like
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
9 3 1 0 view in Ensembl

Cyp2t4

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2t4 was found for the following reasons:
ikmc_project_product_status - KOMP-CSD ES Cell Generated
marker_name - cytochrome P450, family 2, subfamily t, polypeptide 4
symbol - Cyp2t4
interpro_desc - Cyt_P450
marker_symbol_str - Cyp2t4
escell - DEPD00571_1_C09
marker_symbol - Cyp2t4
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR002401||Cyt_P450_E_grp-I||Cytochrome P450, E-class, group I

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Cyp2u1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2u1 was found for the following reasons:
ikmc_project_product_status - NorCOMM ES Cell Generated
marker_name - cytochrome P450, family 2, subfamily u, polypeptide 1
symbol - Cyp2u1
interpro_desc - Cyt_P450_E_grp-I_CYP2D-like
targeting_vector - PG00227_Z_4_C12
marker_symbol_str - Cyp2u1
escell - N01917P1_C_181W_B7
marker_symbol - Cyp2u1
microinjection_status - Chimeras obtained
product_status - ES Cell Generated
marker_type - protein coding gene
interpro - IPR008069||Cyt_P450_E_grp-I_CYP2D-like||Cytochrome P450, E-class, group I, CYP2D-like
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
8 1 0 0 view in Ensembl

Cyp2w1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Cyp2w1 was found for the following reasons:
marker_name - cytochrome P450, family 2, subfamily w, polypeptide 1
symbol - Cyp2w1
interpro_desc - Cyt_P450
marker_symbol_str - Cyp2w1
marker_symbol - Cyp2w1
marker_type - protein coding gene
interpro - IPR002401||Cyt_P450_E_grp-I||Cytochrome P450, E-class, group I
dna_library - C57Bl/6J

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
25 3 0 0 view in Ensembl

Cyp39a1

Cyp39a1 was found for the following reasons:
ccds_id - CCDS28799.1
marker_name - cytochrome P450, family 39, subfamily a, polypeptide 1
symbol - Cyp39a1
interpro_desc - Cyt_P450
marker_symbol_str - Cyp39a1
marker_symbol - Cyp39a1
marker_type - protein coding gene
interpro - IPR002403||Cyt_P450_E_grp-IV||Cytochrome P450, E-class, group IV
dna_library - C57Bl/6J

Gene Details

Marker Name(s): cytochrome P450, family 39, subfamily a, polypeptide 1
view this gene in MGI
Marker Type: protein coding gene
Synonyms: oxysterol 7-alpha-hydroxylase
Location: Chr17:43667425-43751431(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1927096 Ensembl Gene ID: ENSMUSG00000023963 Vega Gene ID:
Entrez Gene ID: 56050 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human CYP39A1 51302
Rat Cyp39a1 301264

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
18 1 0 0 view in Ensembl