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Browsing Data by Marker Symbol: '0-9'

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9930012K11Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930012K11Rik was found for the following reasons:
synonym - AU016692
go_ontology - GO:0008150
chromosome - 14
go_id - GO:0008150
ccds_id - CCDS36967.1
marker_name - RIKEN cDNA 9930012K11 gene
symbol - 9930012K11Rik
targeting_vector - PG00249_Z_1_A07
MGI - MGI:2145726
marker_symbol_str - 9930012K11Rik
mgi - MGI:2145726
escell - HEPD0788_5_C02
ensembl_gene_id - ENSMUSG00000044551
ensembl_peptide_id - ENSMUSP00000061834
go - GO:0008150
marker_symbol - 9930012K11Rik
mgi_accession_id - MGI:2145726
ikmc_targ_rep_allele_id - 93996||35076
ensembl_transcript_id - ENSMUST00000058240
intermediate_vector - PCS00249_A_A03
allele - tm1a(EUCOMM)Hmgu
ikmc_project_id - 93996
vega_gene_id - OTTMUSG00000032872
GO - GO:0008150

Gene Details

Marker Name(s): RIKEN cDNA 9930012K11 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: AU016692
Location: Chr14:70154405-70159502(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2145726 Ensembl Gene ID: ENSMUSG00000044551 Vega Gene ID: OTTMUSG00000032872
Entrez Gene ID: 268759 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C8orf58 541565
Rat RGD1308117 361066
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
(Project: 93996) 		order order view details

Links

ES Cell Clones

Cassette Type 8 Knockout-First Alleles 6 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
HEPD0788_5_A02 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA pass LOXP fail LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_B02 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA pass LOXP pass LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_C02 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_D03 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_E01 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_E03 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_F01 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_F02 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1a(EUCOMM)Hmgu Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
HEPD0788_5_B03 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_C04 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_D01 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_E02 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_E04 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
HEPD0788_5_F04 PG00249_Z_1_G06 C57BL/6N-Atm1Brd/a JM8A3.N1.C2 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
378869 PG00249_Z_1_G06 PCS00249_A_A03 L1L2_Bact_P L3L4_pD223_DTA_T_spec view
378869 PG00249_Z_1_G06 PCS00249_A_A03 L1L2_Bact_P L3L4_pD223_DTA_T_spec view
view original data
Data provided by The International Knockout Mouse Consortium (IKMC)

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
23 2 0 2 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)

9930013L23Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930013L23Rik was found for the following reasons:
synonym - 12H19.01.T7
go_ontology - GO:0005575 | GO:0005623 | GO:0044464 | GO:0005622 | GO:0044424 | GO:0005737
chromosome - 7
go_id - GO:0008150
omim_id - 608366
interpro_id - IPR019316
ccds_id - CCDS21416.1
marker_name - RIKEN cDNA 9930013L23 gene
symbol - 9930013L23Rik
interpro_desc - G8_domain
targeting_vector - PG00048_A_3_C10
MGI - MGI:2443629
marker_symbol_str - 9930013L23Rik
mgi - MGI:2443629
escell - EPD0090_1_D05
ensembl_gene_id - ENSMUSG00000052353
ensembl_peptide_id - ENSMUSP00000063277
go - GO:0008150
marker_symbol - 9930013L23Rik
mgi_accession_id - MGI:2443629
ikmc_targ_rep_allele_id - 29213||14436
ensembl_transcript_id - ENSMUST00000064174
intermediate_vector - PCS00048_A_C10
allele - tm1e(KOMP)Wtsi
ikmc_project_id - IST15109C12
vega_gene_id - OTTMUSG00000025454
interpro - IPR019316||G8_domain||G8 domain
dna_library - 129S7
GO - GO:0008150

Gene Details

Marker Name(s): RIKEN cDNA 9930013L23 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 12H19.01.T7, 6330404C01Rik, AY007814
Location: Chr7:83932857-84086502(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2443629 Ensembl Gene ID: ENSMUSG00000052353 Vega Gene ID: OTTMUSG00000025454
Entrez Gene ID: 80982 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human KIAA1199 57214
Rat RGD1305254 308797
view original data
Data provided by Mouse Genome Informatics (MGI), Ensembl

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 29215) 		order order view details

Links

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 2 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0090_1_C05 PRPGS00048_A_C10 C57BL/6N JM8.N19 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen no reads detected 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0090_1_D05 PRPGS00048_A_C10 C57BL/6N JM8.N19 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen no reads detected 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
43983 PRPGS00048_A_C10 PCS00048_A_C10 L1L2_Bact_P R3R4_pBR_amp view
view original data
Data provided by The International Knockout Mouse Consortium (IKMC)

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
48 7 4 1 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)

9930014A18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930014A18Rik was found for the following reasons:
chromosome - 15
marker_name - RIKEN cDNA 9930014A18 gene
symbol - 9930014A18Rik
MGI - MGI:2444091
marker_symbol_str - 9930014A18Rik
mgi - MGI:2444091
marker_symbol - 9930014A18Rik
mgi_accession_id - MGI:2444091
dna_library - 129S7

Gene Details

Marker Name(s): RIKEN cDNA 9930014A18 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr15:60822965-60831400(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444091 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 320469 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
30 2 0 0 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)

9930017N22Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930017N22Rik was found for the following reasons:
chromosome - 15
marker_name - RIKEN cDNA 9930017N22 gene
symbol - 9930017N22Rik
MGI - MGI:2443961
marker_symbol_str - 9930017N22Rik
mgi - MGI:2443961
marker_symbol - 9930017N22Rik
mgi_accession_id - MGI:2443961

Gene Details

Marker Name(s): RIKEN cDNA 9930017N22 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr15:34126943-34130687
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2443961 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 320403 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

9930021J03Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930021J03Rik was found for the following reasons:
synonym - Gm9832
go_ontology - GO:0003674 | GO:0005488 | GO:0005515
chromosome - 19
go_id - GO:0005515
interpro_id - IPR001487
ccds_id - CCDS37953.1
marker_name - RIKEN cDNA 9930021J03 gene
symbol - 9930021J03Rik
targeting_vector - VG12934
MGI - MGI:2444398
marker_symbol_str - 9930021J03Rik
mgi - MGI:2444398
escell - 12934A-H6
ensembl_gene_id - ENSMUSG00000046138
ensembl_peptide_id - ENSMUSP00000135696
go - GO:0005515
marker_symbol - 9930021J03Rik
mgi_accession_id - MGI:2444398
ikmc_targ_rep_allele_id - VG12934||38116
ensembl_transcript_id - ENSMUST00000175726
allele - tm1(KOMP)Vlcg
ikmc_project_id - 99962
vega_gene_id - OTTMUSG00000042117
interpro - IPR001487||Bromodomain||Bromodomain
dna_library - 129S7
GO - GO:0005515

Gene Details

Marker Name(s): RIKEN cDNA 9930021J03 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: ENSMUSG00000048936, Gm9832
Location: Chr19:29714402-29805989(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444398 Ensembl Gene ID: ENSMUSG00000046138 Vega Gene ID: OTTMUSG00000042117
Entrez Gene ID: 240613 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human KIAA2026 158358
Rat RGD1311595 309307
view original data
Data provided by Mouse Genome Informatics (MGI), Ensembl

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-Regeneron
(Project: VG12934) 		order order view details

Links

ES Cell Clones

Cassette Type 4 Deletion Alleles
Promotor Driven
Allele: genbank file
Targeting Vector: genbank file
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
12934A-A6 VG12934 C57BL/6NTac VGB6 tm1(KOMP)Vlcg Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
12934A-C3 VG12934 C57BL/6NTac VGB6 tm1(KOMP)Vlcg Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
12934A-D5 VG12934 C57BL/6NTac VGB6 tm1(KOMP)Vlcg Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
12934A-H6 VG12934 C57BL/6NTac VGB6 tm1(KOMP)Vlcg Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
VG12934 ZEN-Ub1 view
Vectors ES Cells
EUCOMM
 VEGA Annotation Requested Projects: 99962
view original data
Data provided by The International Knockout Mouse Consortium (IKMC)

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
31 9 0 0 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)

9930022D16Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930022D16Rik was found for the following reasons:
go_ontology - GO:0008150
chromosome - 11
go_id - GO:0008150
marker_name - RIKEN cDNA 9930022D16 gene
symbol - 9930022D16Rik
targeting_vector - PG00115_Y_3_E01
MGI - MGI:2444178
marker_symbol_str - 9930022D16Rik
mgi - MGI:2444178
escell - EPD0222_4_H10
ensembl_gene_id - ENSMUSG00000045065
ensembl_peptide_id - ENSMUSP00000062888
go - GO:0008150
marker_symbol - 9930022D16Rik
mgi_accession_id - MGI:2444178
ikmc_targ_rep_allele_id - 76924||14622
ensembl_transcript_id - ENSMUST00000055404
intermediate_vector - PCS00115_C_E01
allele - tm1a(KOMP)Wtsi
ikmc_project_id - 76924
vega_gene_id - OTTMUSG00000003348
GO - GO:0008150

Gene Details

Marker Name(s): RIKEN cDNA 9930022D16 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr11:109413917-109420405(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444178 Ensembl Gene ID: ENSMUSG00000045065 Vega Gene ID: OTTMUSG00000003348
Entrez Gene ID: 320509 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 22756) 		order order view details

Links

ES Cell Clones

Cassette Type 6 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0222_4_C09 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA pass LOXP pass LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0222_4_D10 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0222_4_E09 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0222_4_E11 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0222_4_F12 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0222_4_H10 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1a(KOMP)Wtsi Knockout-First - Reporter Tagged Insertion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0222_4_F09 PRPGS00115_A_E01 C57BL/6N JM8.N4 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
102787 PRPGS00115_A_E01 PCS00115_B_E01 L1L2_Bact_P L3L4_pZero_DTA_kan view
102787 PRPGS00115_A_E01 PCS00115_B_E01 L1L2_Bact_P L3L4_pZero_DTA_kan view
view original data
Data provided by The International Knockout Mouse Consortium (IKMC)

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
16 7 0 2 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)

9930024M15Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930024M15Rik was found for the following reasons:
chromosome - 10
marker_name - RIKEN cDNA 9930024M15 gene
symbol - 9930024M15Rik
MGI - MGI:3026920
marker_symbol_str - 9930024M15Rik
mgi - MGI:3026920
marker_symbol - 9930024M15Rik
mgi_accession_id - MGI:3026920

Gene Details

Marker Name(s): RIKEN cDNA 9930024M15 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr10:41826537-41829121
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3026920 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 399602 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

9930031P18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930031P18Rik was found for the following reasons:
chromosome - 13
marker_name - RIKEN cDNA 9930031P18 gene
symbol - 9930031P18Rik
MGI - MGI:2442337
marker_symbol_str - 9930031P18Rik
mgi - MGI:2442337
marker_symbol - 9930031P18Rik
mgi_accession_id - MGI:2442337

Gene Details

Marker Name(s): RIKEN cDNA 9930031P18 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr13:107863528-107867270
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2442337 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 319589 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

9930032E11Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930032E11Rik was found for the following reasons:
chromosome - 2
marker_name - RIKEN cDNA 9930032E11 gene
symbol - 9930032E11Rik
MGI - MGI:2444687
marker_symbol_str - 9930032E11Rik
mgi - MGI:2444687
marker_symbol - 9930032E11Rik
mgi_accession_id - MGI:2444687

Gene Details

Marker Name(s): RIKEN cDNA 9930032E11 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr2:16692247-16695625
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444687 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 320764 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

9930038B18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
9930038B18Rik was found for the following reasons:
chromosome - 12
marker_name - RIKEN cDNA 9930038B18 gene
symbol - 9930038B18Rik
MGI - MGI:2442156
marker_symbol_str - 9930038B18Rik
mgi - MGI:2442156
ensembl_gene_id - ENSMUSG00000042976
marker_symbol - 9930038B18Rik
mgi_accession_id - MGI:2442156
ensembl_transcript_id - ENSMUST00000151816
ikmc_project_id - 36022
vega_gene_id - OTTMUSG00000033110
dna_library - 129S7

Gene Details

Marker Name(s): RIKEN cDNA 9930038B18 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms:
Location: Chr12:8873187-8877459(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2442156 Ensembl Gene ID: ENSMUSG00000042976 Vega Gene ID: OTTMUSG00000033110
Entrez Gene ID: 319503 CCDS ID:
view original data
Data provided by Mouse Genome Informatics (MGI)

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
18 3 0 0 view in Ensembl
view original data
Data provided by The Wellcome Trust Sanger Institute (WTSI)