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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '9'

2900079G21Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
2900079G21Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 2900079G21 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms: 620760, Gm6179
Location: Chr9:112234277-112348925(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920268 Ensembl Gene ID: ENSMUSG00000087038 Vega Gene ID: OTTMUSG00000034739
Entrez Gene ID: 620760 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

3000002C10Rik

3000002C10Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3000002C10 gene
view this gene in MGI
Marker Type: pseudogene
Synonyms:
Location: Chr9:109827943-109832706(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3036226 Ensembl Gene ID: ENSMUSG00000070282 Vega Gene ID: OTTMUSG00000032772
Entrez Gene ID: 378954 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
30 2 4 0 view in Ensembl

3110005L24Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
3110005L24Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3110005L24 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:50660528-50661928
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920341 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73091 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

3110037B15Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
3110037B15Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3110037B15 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:112175086-112175464
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920414 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73164 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

3110039I08Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
3110039I08Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3110039I08 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr9:41376561-41432079(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920394 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73144 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

4632418H02Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4632418H02Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4632418H02 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:122127293-122130013
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1925515 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 78265 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4833427G06Rik

4833427G06Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833427G06 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr9:51081313-51102078(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921013 Ensembl Gene ID: ENSMUSG00000032057 Vega Gene ID:
Entrez Gene ID: 235345 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C11orf88 399949
Rat LOC100359479 100359479

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 70640)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0367_4_H08 PRPGS00125_B_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
112747 PRPGS00125_B_D05 PCS00125_C_D05 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view
Vectors ES Cells
KOMP-CSD
(Project: 22833)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 2 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0662_4_A10 PG00125_Z_3_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0662_4_D12 PG00125_Z_3_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
112747 PG00125_Z_3_D05 PCS00125_B_D05 L1L2_Pgk_P L3L4_pD223_DTA_spec view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 0 1 2 view in Ensembl

4833428L15Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4833428L15Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833428L15 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms:
Location: Chr9:45416626-45431232(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921852 Ensembl Gene ID: ENSMUSG00000097074 Vega Gene ID:
Entrez Gene ID: 74602 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4833444G19Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4833444G19Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833444G19 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:70311093-70314323
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2443240 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 320047 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4833445I07Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4833445I07Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833445I07 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2143268 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 102731 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available