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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '9'

2900052N01Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
2900052N01Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 2900052N01 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms: AU067665
Location: Chr9:46913603-46927366(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920290 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73040 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

2900079G21Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
2900079G21Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 2900079G21 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms: 620760, Gm6179
Location: Chr9:112234277-112348925(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920268 Ensembl Gene ID: ENSMUSG00000087038 Vega Gene ID: OTTMUSG00000034739
Entrez Gene ID: 620760 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

3000002C10Rik

3000002C10Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3000002C10 gene
view this gene in MGI
Marker Type: pseudogene
Synonyms:
Location: Chr9:109827943-109832706(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3036226 Ensembl Gene ID: ENSMUSG00000070282 Vega Gene ID: OTTMUSG00000032772
Entrez Gene ID: 378954 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
30 2 4 0 view in Ensembl

3110039I08Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
3110039I08Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 3110039I08 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr9:41376561-41432079(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920394 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73144 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

4833427G06Rik

4833427G06Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833427G06 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr9:51081313-51102078(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921013 Ensembl Gene ID: ENSMUSG00000032057 Vega Gene ID:
Entrez Gene ID: 235345 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C11orf88 399949

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 22833)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 2 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0662_4_A10 PG00125_Z_3_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0662_4_D12 PG00125_Z_3_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm2e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
112747 PG00125_Z_3_D05 PCS00125_B_D05 L1L2_Pgk_P L3L4_pD223_DTA_spec view
Vectors ES Cells
KOMP-CSD
(Project: 70640)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0367_4_H08 PRPGS00125_B_D05 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
112747 PRPGS00125_B_D05 PCS00125_C_D05 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
27 0 1 2 view in Ensembl

4833428L15Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4833428L15Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4833428L15 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms:
Location: Chr9:45416626-45431232(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921852 Ensembl Gene ID: ENSMUSG00000097074 Vega Gene ID:
Entrez Gene ID: 74602 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4921509A06Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4921509A06Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4921509A06 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:78629374-78630128(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1918133 Ensembl Gene ID: ENSMUSG00000091147 Vega Gene ID: OTTMUSG00000036024
Entrez Gene ID: 70883 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4921523L03Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4921523L03Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4921523L03 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:107991684-107995656(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1918163 Ensembl Gene ID: ENSMUSG00000093749 Vega Gene ID: OTTMUSG00000042008
Entrez Gene ID: 70913 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

4921528I07Rik

4921528I07Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4921528I07 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr9:114276683-114317028(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1924299 Ensembl Gene ID: ENSMUSG00000064299 Vega Gene ID:
Entrez Gene ID: 77049 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Rat RGD1560775 501031

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
20 7 3 0 view in Ensembl

4921534A09Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
4921534A09Rik was found for the following reasons:
chromosome - 9

Gene Details

Marker Name(s): RIKEN cDNA 4921534A09 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr9:20382201-20387727
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2444504 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 320674 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available