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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '5'

1700095B10Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700095B10Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700095B10 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr5:112793292-112801701(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1914610 Ensembl Gene ID: ENSMUSG00000098230 Vega Gene ID: OTTMUSG00000043206
Entrez Gene ID: 67360 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

1700096K18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700096K18Rik was found for the following reasons:
chromosome - 5
ikmc_project_id - IST10680H5

Gene Details

Marker Name(s): RIKEN cDNA 1700096K18 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr5:25530013-25531466(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920821 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000045350
Entrez Gene ID: 73571 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

1700108N06Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700108N06Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700108N06 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920810 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73560 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700109H08Rik

1700109H08Rik was found for the following reasons:
chromosome - 5
targeting_vector - PG00266_Z_5_F03

Gene Details

Marker Name(s): RIKEN cDNA 1700109H08 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr5:3571566-3584356(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1924286 Ensembl Gene ID: ENSMUSG00000008307 Vega Gene ID: OTTMUSG00000028546
Entrez Gene ID: 77036 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Rat LOC500007 500007

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
Vector Construction in Progress Projects: 100235, 33999, 119814
Vectors ES Cells
KOMP-CSD
Vector - Initial Attempt Unsuccessful Projects: 115763, 116497, 115720, 116495

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
19 7 2 0 view in Ensembl

1700112J05Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700112J05Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700112J05 gene
view this gene in MGI
Marker Type: lincRNA gene
Synonyms:
Location: Chr5:77006449-77018863(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3696786 Ensembl Gene ID: ENSMUSG00000086632 Vega Gene ID: OTTMUSG00000026993
Entrez Gene ID: 68246 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700112N08Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700112N08Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700112N08 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:122275439-122276624
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920843 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 73593 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700123K08Rik

1700123K08Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700123K08 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr5:138561840-138564694(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMMTools
(Project: 117567)
currently unavailable currently unavailable view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
HEPD0846_8_F04 ETPG00276_Y_8_G09 C57BL/6N JM8.N4 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
428891 ETPG00276_Y_8_G09 L1L2_Bact_P L3L4_pD223_DTA_T_spec view
Vectors ES Cells
KOMP-CSD
(Project: 67935)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 8 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
DEPD00530_3_A09 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_A12 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_B11 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_B12 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_C09 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_C10 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_D11 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
DEPD00530_3_D12 DPGS00181_A_H04 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1(KOMP)Mbp Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen - 3' Screen no reads detected
Loss of WT Allele (LOA) pass Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
237528 DPGS00181_A_H04 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
16 5 1 1 view in Ensembl

1700126H18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700126H18Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700126H18 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr5:66166607-66191335(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1920889 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000045514
Entrez Gene ID: 73639 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

1810017P11Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1810017P11Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1810017P11 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:114975455-114976012
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1916294 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 69044 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1810059H22Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1810059H22Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1810059H22 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms: AI452232, Gm577, LOC231913
Location: Chr5:148953748-148970122(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1917070 Ensembl Gene ID: ENSMUSG00000085455 Vega Gene ID: OTTMUSG00000021222
Entrez Gene ID: 69820 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available