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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '5'

1700014F14Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700014F14Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700014F14 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:60940937-60945648
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1924172 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 76922 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700015F17Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700015F17Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700015F17 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: Gm1686, LOC381716
Location: Chr5:5437827-5479143(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:2686532 Ensembl Gene ID: ENSMUSG00000079666 Vega Gene ID: OTTMUSG00000025941
Entrez Gene ID: 381716 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human LOC102723899 102723899

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
KOMP-CSD
(Project: 76914)
order order view details

ES Cell Clones

Cassette Type 1 Knockout-First Alleles 5 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0500_3_C10 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(KOMP)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen pass 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0500_3_A09 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0500_3_A12 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0500_3_E10 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0500_3_F09 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0500_3_F10 PRPGS00115_B_D11 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(KOMP)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen not confirmed
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
112084 PRPGS00115_B_D11 PCS00115_C_D11 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view
112084 PRPGS00115_B_D11 PCS00115_C_D11 L1L2_Bact_P R3R4_pBR_DTA+_Bsd_amp view

DNA Clone Resources no data available

1700015O03Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700015O03Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700015O03 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:123543791-123544359
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1925746 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 78496 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700016B01Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016B01Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700016B01 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:112156236-112165243
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922890 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 75640 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700016C19Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016C19Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700016C19 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:113352046-113354952
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921478 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 74228 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700016F12Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016F12Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700016F12 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:96849504-96852937
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1916674 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 69424 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700016H13Rik

1700016H13Rik was found for the following reasons:
chromosome - 5
targeting_vector - PG00065_Z_5_H08

Gene Details

Marker Name(s): RIKEN cDNA 1700016H13 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr5:103648039-103656010(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1921468 Ensembl Gene ID: ENSMUSG00000029320 Vega Gene ID: OTTMUSG00000029324
Entrez Gene ID: 74218 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C4orf36 132989
Rat LOC498330 498330

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
(Project: 24332)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0116_4_C02 PRPGS00065_A_H08 C57BL/6N JM8.N4 tm1e(EUCOMM)Wtsi Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not attempted LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
47388 PRPGS00065_A_H08 PCS00065_A_H08 L1L2_Bact_P L3L4_pD223_DTA_spec view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
23 1 0 1 view in Ensembl

1700017L05Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700017L05Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700017L05 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr5:77465456-77468857(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1916620 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 69370 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700018F24Rik

1700018F24Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700018F24 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: AV045857
Location: Chr5:145042990-145045681(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
Design Completed Projects: 97225
Vectors ES Cells
KOMP-Regeneron
Design Not Possible Projects: VG16982

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
12 8 0 0 view in Ensembl

1700019F05Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700019F05Rik was found for the following reasons:
chromosome - 5

Gene Details

Marker Name(s): RIKEN cDNA 1700019F05 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr5:73912896-73920420
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1916652 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 69402 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available