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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '1'

Rnu7-ps3

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rnu7-ps3 was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): U7 small nuclear RNA, pseudogene 3
view this gene in MGI
Marker Type: pseudogene
Synonyms:
Location: Chr1:136990207-136990270(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:105101 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 19869 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Rp1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rp1 was found for the following reasons:
synonym - Rp1h
chromosome - 1
ccds_id - CCDS14804.1
marker_name - retinitis pigmentosa 1 (human)

Gene Details

Marker Name(s): retinitis pigmentosa 1 (human)
view this gene in MGI
Marker Type: protein coding gene
Synonyms: Dcdc3, Orp1, Rp1h, mG145, oxygen-regulated protein 1
Location: Chr1:4343507-4360314(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1341105 Ensembl Gene ID: ENSMUSG00000025900 Vega Gene ID:
Entrez Gene ID: 19888 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human RP1 6101
Rat Rp1 681377

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
Design Completed Projects: 98825
Vectors ES Cells
KOMP-Regeneron
Design Not Possible Projects: VG11625

DNA Clone Resources no data available

Rpe

Rpe was found for the following reasons:
chromosome - 1
ccds_id - CCDS15022.1
allele - tm1a(EUCOMM)Wtsi

Gene Details

Marker Name(s): ribulose-5-phosphate-3-epimerase
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 2810429B02Rik, 5730518J08Rik
Location: Chr1:66700831-66719805(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1913896 Ensembl Gene ID: ENSMUSG00000026005 Vega Gene ID: OTTMUSG00000021851
Entrez Gene ID: 66646 CCDS ID:
Interpro Families
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human RPE 6120
Rat Rpe 501157

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
(Project: 36314)
order order view details

ES Cell Clones

Cassette Type 4 Knockout-First Alleles 0 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0371_3_D11 PG00084_Z_2_D08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(EUCOMM)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA fail LOXP fail LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0371_3_G10 PG00084_Z_2_D08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(EUCOMM)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA fail LOXP pass LACZ fail
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0371_3_G12 PG00084_Z_2_D08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(EUCOMM)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA pass LOXP pass LACZ pass
Chromosome 1 pass Chromosome 8a pass Chromosome 8b -
Chromosome 11a - Chromosome 11b pass Chromosome Y pass
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
EPD0371_3_H12 PG00084_Z_2_D08 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(EUCOMM)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential

No clones available.

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
82543 PG00084_Z_2_D08 PCS00084_A_D08 L1L2_Bact_P L3L4_pD223_DTA_spec view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
31 4 0 1 view in Ensembl

Rpl10a-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl10a-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein L10A, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein L10A, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: ENSMUSG00000061631, Gm15451, OTTMUSG00000022086
Location: Chr1:64993951-64994604(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3705885 Ensembl Gene ID: ENSMUSG00000084416 Vega Gene ID: OTTMUSG00000022086
Entrez Gene ID: 100043141 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

Rpl12-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl12-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein L12, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein L12, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: EG241053, Gm4957
Location: Chr1:36957930-36958427(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3646154 Ensembl Gene ID: ENSMUSG00000080054 Vega Gene ID: OTTMUSG00000029554
Entrez Gene ID: 241053 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
Withdrawn From Pipeline Projects: 100959
Vectors ES Cells
KOMP-Regeneron
Design Not Possible Projects: VG14685

DNA Clone Resources no data available

Rpl17-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl17-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein L17, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein L17, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: Gm11589, OTTMUSG00000002375
Location: Chr1:61075674-61076225(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3652107 Ensembl Gene ID: ENSMUSG00000082804 Vega Gene ID: OTTMUSG00000002375
Entrez Gene ID: 433313 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Rpl18-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl18-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein L18, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein L18, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: Gm11580, OTTMUSG00000002279, Rpl18-rs8
Location: Chr1:60900898-60901422(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:98018 Ensembl Gene ID: ENSMUSG00000081382 Vega Gene ID: OTTMUSG00000002279
Entrez Gene ID: 667100 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Rpl19-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl19-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein L19, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein L19, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: ENSMUSG00000064281, Gm15424, OTTMUSG00000021592
Location: Chr1:85012114-85012704(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3642668 Ensembl Gene ID: ENSMUSG00000064281 Vega Gene ID: OTTMUSG00000021592
Entrez Gene ID: 100039695 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

Rpl21-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl21-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein 21, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein 21, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: EG433387, Gm5534
Location: Chr1:184617215-184617731(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:3647596 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 433387 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

Rpl23a-ps1

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
Rpl23a-ps1 was found for the following reasons:
chromosome - 1
marker_name - ribosomal protein 23A, pseudogene 1

Gene Details

Marker Name(s): ribosomal protein 23A, pseudogene 1
view this gene in MGI
Marker Type: pseudogene
Synonyms: EG227054, Gm4851
Location: Chr1:45981548-45982012(+)
Related Human Conditions (from OMIM) - no related Human Condition

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available