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Mammalian Phenotype
Chromosome
Marker Symbol

Browsing Data by Chromosome: '1'

1700012E03Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700012E03Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700012E03 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr1:120435805-120438455(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1923817 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000049074
Entrez Gene ID: 76567 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700015E13Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700015E13Rik was found for the following reasons:
chromosome - 1
ccds_id - CCDS15471.1

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
23 3 0 0 view in Ensembl

1700016C15Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016C15Rik was found for the following reasons:
chromosome - 1
targeting_vector - PG00072_W_1_A08
escell - EPD0149_1_G09
allele - tm1a(KOMP)Wtsi

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
31 5 0 0 view in Ensembl

1700016L21Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016L21Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700016L21 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms: Jr3
Location: Chr1:80445932-80479867(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1919458 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000045117
Entrez Gene ID: 72208 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

1700016P22Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700016P22Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700016P22 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr1:73022484-73022878
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1924180 Ensembl Gene ID: Vega Gene ID:
Entrez Gene ID: 76930 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources no data available

1700019A02Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700019A02Rik was found for the following reasons:
chromosome - 1
allele - tm1e(EUCOMM)Hmgu

Gene Details no data available

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells no data available

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
24 6 0 0 view in Ensembl

1700019D03Rik

1700019D03Rik was found for the following reasons:
chromosome - 1
ccds_id - CCDS14949.1
targeting_vector - N01993P1_T_186.5_G07
escell - N01993P1_C_199W_A1
intermediate_vector - N01993P1_I_186.5_G07
allele - tm1(NCOM)Mfgc
ikmc_project_id - IST14214D1

Gene Details

Marker Name(s): RIKEN cDNA 1700019D03 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms: 2410136C24Rik, AA410151
Location: Chr1:52922324-53020179(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1914330 Ensembl Gene ID: ENSMUSG00000043629 Vega Gene ID: OTTMUSG00000021472
Entrez Gene ID: 67080 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C2orf88 84281
Rat LOC102556334 102556334

WTSI Phenotyping no data available

Mice

Allele Name Allele Type EMMA ID Colony Prefix ES Cell/Common Name Genetic Background QC/Screening Data MI/Distribution Centre
contact distributor 1700019D03Riktm1(NCOM)Mfgc Reporter-Tagged Deletion (Promotor Driven Cassette) TCPA0810 N01993P1_C_199W_A1 C57BL/6N;B6N-Tyrc/BrdCrCrl;C57BL/6N view data
about )
TCP
Southern Blot na TV Backbone Assay na 5' LR-PCR na
Loss of WT Allele (LOA) qPCR na Homozygous Loss of WT Allele (LOA) SR-PCR na Neo Count (qPCR) na
LacZ SR-PCR na 5' Cassette Integrity Neo SR-PCR na
Mutant Specific SR-PCR na LoxP Confirmation na 3' LR-PCR na
Genotyping Comment

IKMC Vectors and ES Cells

Vectors ES Cells
NorCOMM
(Project: 67734)
order order view details

ES Cell Clones

Cassette Type 0 Knockout-First Alleles 2 Targeted Non-Conditional Alleles
Promotor Driven
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential

No clones available.

ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
N01993P1_C_199W_A1 N01993P1_T_186.5_G07 C57BL/6N C2 tm1(NCOM)Mfgc Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
N01993P1_C_199W_B3 N01993P1_T_186.5_G07 C57BL/6N C2 tm1(NCOM)Mfgc Reporter-Tagged Deletion (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen - LoxP Screen - 3' Screen -
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
239053 N01993P1_T_186.5_G07 N01993P1_I_186.5_G07 L1L2_GOHANU L3L4_pZero_DTA_kan view
Vectors ES Cells
EUCOMM
(Project: 81260)
order order view details

ES Cell Clones

Cassette Type 1 Knockout-First Alleles 1 Targeted Non-Conditional Alleles
Promotor Driven
Allele: genbank file | image
Targeting Vector: genbank file | image
Allele: genbank file | image
Targeting Vector: genbank file | image
ES Cell Clones With Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
EPD0845_5_F06 PG00227_Z_7_G10 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1a(EUCOMM)Wtsi Knockout First, Reporter-tagged insertion with conditional potential (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen not confirmed LoxP Screen pass 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -
ES Cell Clones Without Conditional Potential
ES Cell Clone Targeting Vector ES Cell Strain ES Cell Line Allele Allele Type QC/Screening Data
HEPD0729_1_A03 PG00227_Z_7_G10 C57BL/6N-Atm1Brd/a JM8A3.N1 tm1e(EUCOMM)Hmgu Targeted Non-Conditional (Promotor Driven Cassette) view data    ( about )
Production Centre
5' Screen pass LoxP Screen not confirmed 3' Screen pass
Loss of WT Allele (LOA) - Vector Integrity -
Distribution Centre
Karyotype - Copy Number - Cells Thawed Correctly -
5' LR-PCR - 5' SR-PCR - 3' SR-PCR -
LOA - LOXP - LACZ -
Chromosome 1 - Chromosome 8a - Chromosome 8b -
Chromosome 11a - Chromosome 11b - Chromosome Y -
User/Mouse Clinic
Southern Blot - Map Test - Karyotype -
TV Backbone Assay - 5' LR-PCR - Loss of WT Allele (LOA) -
Neo Count (qPCR) - LacZ SR-PCR - 5' Cassette Integrity -
Neo SR-PCR - Mutant Specific SR-PCR - LoxP Confirmation -
3' LR-PCR -

Targeting Vectors

Design Targeting Vector Intermediate Vector Cassette Backbone Targeting Vector Genbank File
300629 PG00227_Z_7_G10 PCS00227_A_G07 L1L2_Bact_P L3L4_pD223_DTA_T_spec view
300629 PG00227_Z_7_G10 PCS00227_A_G07 L1L2_Bact_P L3L4_pD223_DTA_T_spec view

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
19 2 1 2 view in Ensembl

1700019O17Rik

1700019O17Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700019O17 gene
view this gene in MGI
Marker Type: protein coding gene
Synonyms:
Location: Chr1:86426329-86428052(+)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1919113 Ensembl Gene ID: ENSMUSG00000036574 Vega Gene ID: OTTMUSG00000042357
Entrez Gene ID: 71863 CCDS ID:
Orthologs / Homologs
Species Marker Symbol Entrez Gene ID Ensembl Gene ID
Human C2orf57 165100
Rat LOC501180 501180

WTSI Phenotyping no data available

Mice no data available

IKMC Vectors and ES Cells

Vectors ES Cells
EUCOMM
Design Completed Projects: 97227
Vectors ES Cells
KOMP-Regeneron
Design Not Possible Projects: VG14576

DNA Clone Resources

C57Bl/6J Bacs 129 Bacs MICER clones KO Targeting Vectors
14 1 2 0 view in Ensembl

1700019P21Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700019P21Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700019P21 gene
view this gene in MGI
Marker Type: unclassified gene
Synonyms:
Location: Chr1:138876272-138876950(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1922796 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000045125
Entrez Gene ID: 75546 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available

1700020N18Rik

Datasets: Gene Details WTSI Phenotyping Mice IKMC Vectors and ES Cells DNA Clone Resources
1700020N18Rik was found for the following reasons:
chromosome - 1

Gene Details

Marker Name(s): RIKEN cDNA 1700020N18 gene
view this gene in MGI
Marker Type: unclassified non-coding RNA gene
Synonyms:
Location: Chr1:91404879-91406029(-)
Related Human Conditions (from OMIM) - no related Human Condition
More Information
MGI Gene Accession: MGI:1914336 Ensembl Gene ID: Vega Gene ID: OTTMUSG00000045131
Entrez Gene ID: 67086 CCDS ID:

WTSI Phenotyping no data available

Mice no data available

DNA Clone Resources no data available