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Statistical Genetics At The Sanger Institute
Overview

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Statistical genetics is key to understanding genetic variation and expertise is embedded throughout many groups at the WTSI. In addition, the Institute has important long-term collaborative links with leading statistical geneticists in the UK and beyond.

The following links and descriptions give a flavour of the breadth and depth of statistical genetics (as distinct from computational biology) ongoing at the Institute:


Genetic association and linkage studies:
  • Inês Barroso Association with T2D and metabolic disorders
  • Manolis Dermitzakis - Identifying genetic variation influencing gene expression
  • Richard Durbin - Fine-mapping using Ancestral Recombination Graphs
  • Matthew Hurles - Methods for performing association between CNV and complex traits
  • Dominic Kwiatkowski - Association and linkage with Malaria susceptibilty
  • Ralph McGinnis - Disease susceptibility and drug response

Phylogenetics:
  • CNV Project - Structural variation among primate species
  • Manolis Dermitzakis - Identifying fast-evolving sequences
  • Richard Durbin - TreeFam and yeast comparative genomics

Population genetics:
  • Manolis Dermitzakis - Patterns of selection on functional elements
  • Matthew Hurles - Inferring gene conversion from patterns of sequence variation
  • Dominic Kwiatkowski - Population structure in Africa
  • Chris Tyler-Smith - Human evolution and recent functional selection

Assaying genetic variation:
  • Cancer Genome Project - Algorithms for identifying somatic variation
  • CNV Project - CNV finding algorithms
  • Panos Deloukas and Dominic Kwiatowksi - SNP genotyping algorithms
  • Manolis Dermitzakis and Dominic Kwiatowksi - Patterns of sequence variation in Plasmodium
  • Richard Durbin - Inference and imputation of sequence variation
  • Ralph McGinnis - Algorithms for data filtering and analysis

Collaborators:
  • David Clayton, Cambridge Institute for Medical Research, University of Cambridge
  • Peter Donnelly, Department of Statistics, University of Oxford
  • Jonathan Marchini, Department of Statistics, University of Oxford
  • Gil McVean, Department of Statistics, University of Oxford
  • Simon Tavare, CRUK Cambridge Research Institute, Cambridge
  • Nick Wareham, MRC Epidemiology Unit, Cambridge
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Last Modified Wed May 7 12:03:00 2008

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