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Solexa Whole Genome Paired End Analysis

Summary

A paired-end sequencing approach using Illumina massively parallel sequencing has been used to characterise structural variants in two Lung Cancer Cell Lines.



Reference:
Identification of somatically acquired rearrangements in cancer using genome-wide massively parallel paired-end sequencing. Campbell PJ, et al.
Nat Genet. 2008 Jun;40(6):722-9. Epub 2008 Apr 27. PMID: 18438408



Please visit the CGP Trace Archive for the raw ztr and fastq data files for this study.

Samples with Mutations


Lung Rearrangement Screens:
  • NCI-H2171
  • NCI-H1770

Statistics
  Samples2 
 COSMIC Point Mutations241 
  Structural Variants40 
  Observed Breakpoints103 
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Last Modified Thu Feb 24 14:28:58 2011

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