uk.ac.sanger.cgp.standalonecsa.beans
Class Constants.VariantType

java.lang.Object
  uk.ac.sanger.cgp.standalonecsa.beans.Constants.VariantType

Enclosing class:

Constants

public static class Constants.VariantType
extends java.lang.Object

Constants used to indicate variant type.

Field Summary

static int	COMPLEX_INDEL Complex insertion/deletion variant type.
static int	DEL Deletion variant type.
static int	GERM_SUB Germline substitution variant type.
static int	INS Insertion variant type
static int	REF_SUB Reference substitution variant type.
static int	SPEC_INDEL Speculative insertion/deletion variant type.
static int	SUB Substitution variant type.
static int	TRACE_HOLE Trace hole variant type.

Method Summary

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

SUB

public static final int SUB

Substitution variant type.

See Also:

Constant Field Values

INS

public static final int INS

Insertion variant type

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Constant Field Values

DEL

public static final int DEL

Deletion variant type.

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Constant Field Values

COMPLEX_INDEL

public static final int COMPLEX_INDEL

Complex insertion/deletion variant type.

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Constant Field Values

REF_SUB

public static final int REF_SUB

Reference substitution variant type.

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Constant Field Values

SPEC_INDEL

public static final int SPEC_INDEL

Speculative insertion/deletion variant type.

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Constant Field Values

TRACE_HOLE

public static final int TRACE_HOLE

Trace hole variant type.

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Constant Field Values

GERM_SUB

public static final int GERM_SUB

Germline substitution variant type.

See Also:

Constant Field Values