uk.ac.sanger.cgp.standalonecsa.beans
Class Constants.VariantType

java.lang.Object
  extended by uk.ac.sanger.cgp.standalonecsa.beans.Constants.VariantType
Enclosing class:
Constants

public static class Constants.VariantType
extends java.lang.Object

Constants used to indicate variant type.


Field Summary
static int COMPLEX_INDEL
          Complex insertion/deletion variant type.
static int DEL
          Deletion variant type.
static int GERM_SUB
          Germline substitution variant type.
static int INS
          Insertion variant type
static int REF_SUB
          Reference substitution variant type.
static int SPEC_INDEL
          Speculative insertion/deletion variant type.
static int SUB
          Substitution variant type.
static int TRACE_HOLE
          Trace hole variant type.
 
Method Summary
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

SUB

public static final int SUB
Substitution variant type.

See Also:
Constant Field Values

INS

public static final int INS
Insertion variant type

See Also:
Constant Field Values

DEL

public static final int DEL
Deletion variant type.

See Also:
Constant Field Values

COMPLEX_INDEL

public static final int COMPLEX_INDEL
Complex insertion/deletion variant type.

See Also:
Constant Field Values

REF_SUB

public static final int REF_SUB
Reference substitution variant type.

See Also:
Constant Field Values

SPEC_INDEL

public static final int SPEC_INDEL
Speculative insertion/deletion variant type.

See Also:
Constant Field Values

TRACE_HOLE

public static final int TRACE_HOLE
Trace hole variant type.

See Also:
Constant Field Values

GERM_SUB

public static final int GERM_SUB
Germline substitution variant type.

See Also:
Constant Field Values