ARNIE: AVEXIS Receptor Network with Integrated Expression

Welcome to ARNIE!

ARNIE is an online database that integrates the extracellular protein interaction network generated in our lab using AVEXIS technology with spatiotemporal expression patterns for all genes in the network. This online tool allows users to browse the network by clicking on individual proteins, or by specifying the spatiotemporal parameters using the drop-down menus. Clicking on connector lines will allow users to compare stage-matched expression patterns for genes encoding interacting proteins. Additionally, users can rapidly search for their genes in the network using the BLAST server provided.

Please cite: Martin et al. Mol Cell Proteomics. 2010 v9 p 2654-65. PMID: 20802085

Find Gene: AlcamAppaAppbBcanBgnBocCadm1bCadm3Cadm4ChadCntfrCntn1aDcnDlcElfn1Elfn2EpycFgfr1bFgfr2Fgfr3Fgfr4Fgfrl1aFgfrl1bFlrt1aFlrt1bFlrt3Hapln2Igfbp7Igsf21bIslr2Jam2Jam3KdrlKirrelKirrel3Lgi1aLingo1aLingo1bLrrc17Lrrc24Lrrc4aLrrc4cLrrn1Lrrtm1Lrrtm2Lrrtm4l1Lrrtm4l2MagMpzl2Mpzl3MuskMusk-sv1Mxra8aNadl1.2Ncam1Ncam3Negr1Neo1Nitr14bNlcamNptnNtmNtn1bOptcPdgfraPdgfrlPvrl2lPvrl3lRobo1Robo2Robo3aRobo3bRtn4rl1Sc:d0179Sc:d0220Sc:d0254Sc:d0647Sc:d805Sid4Slit1bSlit2Slit3Unc5bVasnZgc:110372Zgc:123297Zgc:158817Zgc:162468Zgc:56201Zgc:77222Zgc:92647Zgc:92901

Select Tissue: allcardiovascular systemrenal systemnervous and sensory systemsliver and biliary systemendocrine systemskeletal systemdigestive systemmusculature systemimmune systemhematopoietic systemother Select Stage: allgastrulasegmentationpharyngulahatchinglarval

Blast Search with your sequence against our interaction genes

Zebrafish Orthologues Supplementary Table

Zebrafish Paralogues Supplementary Table

Zebrafish Gene by Gene Orthologues

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Last Modified Thu Feb 2 11:58:00 2012

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