Mycobacterium leprae genome project

Gene name:		Class:	Start/End:	Length:	Molecular weight:
carB	ML0536	I.F.2	649608 / 652997	3390 bp / 1129 aa	120927 Da
Product:
putative carbamoyl-phosphate synthase subunit
Description:
Similar to M. tuberculosis carB, Rv1384, carbamoyl-phosphate synthase subunit. Similar to many e.g. Escherichia coli carB, carbamoyl-phosphate synthase subunit, SW:CARB_ECOLI (P00968) (1072 aa); Fasta score E(): 0, 51.4% identity in 1116 aa overlap. Contains 2 Pfam matches to entry PF00289 CPSase_L_chain, Carbamoyl-phosphate synthase (CPSase). Contains 2 x PS00867 Carbamoyl-phosphate synthase subdomain signature 2. Contains PS00013 Prokaryotic membrane lipoprotein lipid attachment site. Contains PS00866 Carbamoyl-phosphate synthase subdomain signature 1.
Translation:
MRPERGTLVP RRTDLNHVLV IGSGPIVIGQ ACEFDYAGTQ ACRVLRAEGL QVSLVNSNPA TIMTDPEFAD HTYVEPITPA FVERVIVQQA ERGNRIDALL ATLGGQTALN TAVALYENGV LERYGVELIG ADFEAIQRGE DRQRFKDLVA KVGGESARSK VCFTMDEVRE TVEDLGLPVV VRPSFTMGGL GSGMAHSDEE VGRMAGAGLV ASPSANVLIE ESVYGWKEFE LELMRDGHDS VVVVCSIENV DPMGVHTGDS VTVAPAMTLT DWEYQRMRDL GIAILREVGV DTGGCNIQFA INPHDGRLIV IEMNPRVSRS SALASKATGF PIAKIAVKLA VGYTLDEILN DITKETPACF EPALDYVVVK APRFAFEKFP GADPTLTTTM KSVGEAMSLG RNFVEALGKV MRSLETGRFG FWTAPDPQGD VDQVLLRLKT PTEGRLYDVE LALRLGASTE KVAQVSGIDP WFVAQIGELV KLRDELVAAP VLDAELLRRA KHNGLSDRQI TALRPELLGE DGVRSLRKRL GIHPVYKTVD TCAAEFEAKT PYHYSSYELD PAAETEVVPQ TEKPKVLILG SGPNRIGQGI EFDYSCVHAA ITLSHNGFET VMVNCNPETV STDYDTADRL YFEPLTFEDV LEVFYAEEQS AAGGAGVAGV IVQLGGQTPL GLAQRLADAG VPIVGTSPEA IDLAEDRGAF GDVLTAAGLP APKYGTATTF AQARRIAAEI GYPVLVRPSY VLGGRGMEIV YDEETLKDYI TRATALSHEH PVLVDRFLED AVEIDVDALC DGTEVYIGGV MEHIEEAGIH SGDSACALPP VTLGRSDLEK VRQATEAIAR GIGVVGLLNV QYALKEDVLY VLEANPRASR TVPFVSKATA IPLAKACARI MLGSSISQLR FEGMLAASGD GGNVASHAPI AVKEAVLPFN RLRRADGAAI DSLLGPEMKS TGEVMGIDHD FGRAFAKSQT AAYGSLPTQG TVFVSVANRD KRLLVFPVKR LADLGFHVIA TEGTAEMLRR KGIPCDEVRK HFEPPKAGRP ALSAVDAIRA GDVDMVINTP YGNSGPRIDG YEIRSAAVSV NIPCVTTVQG ASAAVQGIEA GIRGDIGVRS LQELHSAIGA GIAADNEVQ
Pfam domains present:
`Pfam match to entry PF00289 CPSase_L_chain, Carbamoyl-phosphate synthase (CPSase), score 551.50, E-value 5.7e-162 Pfam match to entry PF00289 CPSase_L_chain, Carbamoyl-phosphate synthase (CPSase), score 188.30, E-value 5.9e-53`
Prosite patterns present:
`PS00013 Prokaryotic membrane lipoprotein lipid attachment site PS00867 Carbamoyl-phosphate synthase subdomain signature 2 PS00866 Carbamoyl-phosphate synthase subdomain signature 1 PS00867 Carbamoyl-phosphate synthase subdomain signature 2`

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Last Modified Thu Oct 23 12:50:24 2003

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