Contact WTSI Webmaster Printer friendly format Login to WTSI resources WTSI RSS feed
All Sequencing
  • Human (HGP)
  • Pathogens
  • Blast
  • C. jejuni
  • Overview
  • Gene list
  • Stable RNAs
  • Polymorphisms
  • Blast Search
  • CDS Search
  • EMBL file
  • Sequence FTP
  • Entrez Genomes
  • Artemis

  • Microbes Home
  • Website Search
  • People Search
  • Library Services
  • Site Map
  • Feedback / Help
Retrieve BLAST result
ddlA
Gene name: Class: Start/End: Length: Molecular weight:
ddlA Cj0798c 3.C.4 748257 / 749297 1041 bp / 346 aa 39908 Da
Product:

putative D-alanine--D-alanine ligase

Description:

Cj0798c, ddlA, possible D-alanine--D-alanine ligase, len: 346 aa; similar to e.g. DDLA_ECOLI D-alanine--D-alanine ligase A (EC 6.3.2.4) (364 aa), fasta scores; opt: 335 z-score: 386.3 E(): 3.2e-14, 25.2% identity in 322 aa overlap, and VANA_ENTFC vancomycin/teicoplanin A-type resistance protein (343 aa), fasta scores; opt: 415 z-score: 477.2 E(): 2.8e-19, 27.9% identity in 312 aa overlap. 54.3% identity to HP0738. Contains PS00843 and PS00844 D-alanine--D-alanine ligase signatures 1 and 2

Translation:
MKFAILFGGN SYEHEISIVS AVVLKKVINQ NLEFIFCDEE RRFYHIPSEK MNSKTFSTKA YKKEKELFIK QGGFFSKGFL KENKLECECV INLIHGRDGE DGKIAALFEF YSIKFIGPRL EASVLSFNKE LTKLYAKSVG VKTLDYTILR KNQNSKEKLS FPCIIKPARL GSSIGISIVK DEKDLEYAKD VGFEFDNDLV VEEFKNNIKE YNLAGCMIND EFVFSIIEEP KKKEFLDFEQ KYLSFSGHNE LIEADLSEEL KEKLKDSFKK IYNPLFKGAL IRCDFFILDN EIYLNEINPN PGSLANYLFK DFNTTLNALA DQISLEKMIK INYNFLHSIN GQKGKL
Pfam domains present:
None
Prosite patterns present:
PS00844 D-alanine--D-alanine ligase signature 2
PS00843 D-alanine--D-alanine ligase signature 1
Information Projects Other Services
Sanger Home
Sitemap
Site Search
Information
Careers
Press
News
Seminars
Workshops
Publications
Staff Theses
Travel Directions
Research Teams
Research Faculty
Personnel Search
Human Genetics
Model Organism Genetics
Pathogen Genetics
Bioinformatics
Sequencing
Library
Helpdesk
Webmail
VPN Access
Sign In
SSO Pass. Reset

webmaster@sanger.ac.uk

Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK  Tel:+44 (0)1223 834244

Last Modified Thu Oct 23 15:36:51 2003

Genome Research Limited is a charity registered in England with number 1021457

Data Sharing Policy | Conditions of Use | Copyright