| Gene name: | Class: | Start/End: | Length: | Molecular weight: | |
|---|---|---|---|---|---|
| sdhA | Cj0437 | 1.B.3 | 405333 / 407168 | 1836 bp / 611 aa | 66373 Da |
| Product: | |||||
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succinate dehydrogenase flavoprotein subunit |
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| Description: | |||||
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Cj0437, sdhA, probable succinate dehydrogenase flavoprotein subunit, len: 611 aa; similar to many e.g. DHSA_ECOLI succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) (588 aa), fasta scores; opt: 1036 z-score: 1136.5 E(): 0, 37.3% identity in 569 aa overlap and to e.g. FRDA_WOLSU fumarate reductase flavoprotein subunit (656 aa), fasta scores; opt: 862 z-score: 1211.2 E(): 0, 33.3% identity in 595 aa overlap. No Hp ortholog, but 32.3% identity to HP0192 fumarate reductase, flavoprotein subunit (frdA), and 33.8% identity to C. jejuni frdA (Cj0409). Contains Pfam match to entry PF00890 FAD_binding_2, FAD binding domain, score 386.60, E-value 2.5e-112 |
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| Translation: | |||||
MGEFSRRDFI
KTACISVGAL
AASSSGVYAL
DDSSKMDKDI
NLPSCDVLVI
GSGGAGLCAA
AAVRKENPKL
SVVVATKMMP
SRNATCMAEG
GINGVTDFSN
GDSYKLHAYD
TIKGGAYLVD
QDAALKFCEL
AGKAIFNMDF
IGTLFSRNEQ
GGVAQRLMGG
ASKKRCNYSA
DKTGHILMHS
CLDDAISSGV
KFLMNHELLD
IGVVDGKCEG
VVLRDIQSGG
IYPVLCKALV
IATGGYTRIF
YNRTSTPFIA
TGDGVAAALR
AGLGFEDPEM
IQFHPTGVAN
GGTLITEAAR
GEGGYLLNNR
GERFMKNYHE
KMELAPRDVV
ARAIETEIRE
GRGYGEGLGA
YVLCDVRHLG
KEKILKDLPK
IRHTAMLFEN
IDLVDTPVPI
RPTAHYSMGG
IEVAKFEDMG
TKIAGIYVGG
EASCISIHGA
NRLGGNSLAD
AVVTGHLAGI
GATNYAKDAS
FGKGAKTHEL
AQKWQVRFKE
ITNNGGNGQE
MYELREELGS
QNWDNMGIFR
TQEKLDLLAK
KLEDIQARYE
KIRIPNPNEV
MNTAFTDYVE
LGNLILLSRC
ACLAARNRLE
SRGAHTREDY
PKRDDKNFLK
HSIVNLENDE
LKLSYKDVVV
TEFSLDGRRV
Q
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| Pfam domains present: | |||||
Pfam match to entry PF00890 FAD_binding_2, FAD binding domain, score 386.60, E-value 2.5e-112
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| Prosite patterns present: | |||||
None
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Last Modified Thu Oct 23 15:36:36 2003
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