Pathway MAPPs: View trapped genes in biological pathways
Last Update: 2004-12-21
In collaboration with GenMAPP, the IGTC has mapped public gene trap data from members of the International Gene Trap Consortium (IGTC) to sets of biological pathways and gene groupings. Users can browse the pathway diagrams and view which genes within the pathway have been trapped. Genes with gene trap insertions are coloured on the pathway diagram depending upon the number of traps to the gene. Clicking on a gene of interest will bring up a backpage of annotation data and detailed information about the gene trap cell lines.
GenMAPP.org is an academically based orgainzationthat develops and supports GenMAPP (Gene MicroArray Pathway Profiler), a computer application designed to visualize gene expression data on maps representing pathways and sets of related genes.
MAPPs
cellular_process-GenMAPP
Mm_Apoptosis.mappMm_Apoptosis_GenMAPP.mapp
Mm_Apoptosis_KEGG.mapp
Mm_Cell_Cycle_KEGG.mapp
Mm_DNA_replication_Reactome.mapp
Mm_G13_Signaling_Pathway.mapp
Mm_G1_to_S_cell_cycle_Reactome.mapp
Mm_G_Protein_Signaling.mapp
Mm_Integrin-mediated_cell_adhesion_KEGG.mapp
Mm_MAPK_Cascade.mapp
Mm_mRNA_processing_binding_Reactome.mapp
Mm_Ovarian_Infertility_Genes.mapp
Mm_Regulation_of_Actin_Cytoskeleton_KEGG.mapp
Mm_RNA_transcription_Reactome.mapp
Mm_S1P_Signaling.mapp
Mm_TGF_Beta_Signaling_Pathway.mapp
Mm_Translation_Factors.mapp
Mm_Wnt_Signaling.mapp
metabolic_process-GenMAPP
Mm_Acetylcholine_Synthesis.mappMm_Biogenic_Amine_Synthesis.mapp
Mm_Cholesterol_Biosynthesis.mapp
Mm_Eicosanoid_Synthesis.mapp
Mm_Electron_Transport_Chain.mapp
Mm_Fatty_Acid_Degradation.mapp
Mm_Fatty_Acid_Synthesis.mapp
Mm_Glucocorticoid_Mineralocorticoid_Metabolism.mapp
Mm_Glycogen_Metabolism.mapp
Mm_Glycolysis_and_Gluconeogenesis.mapp
Mm_Heme_Biosynthesis.mapp
Mm_Krebs-TCA_Cycle.mapp
Mm_Mitochondrial_fatty_acid_betaoxidation.mapp
Mm_Nucleotide_Metabolism.mapp
Mm_Pentose_Phosphate_Pathway.mapp
Mm_Prostaglandin_synthesis_regulation.mapp
Mm_Statin_Pathway_PharmGKB.mapp
Mm_Steroid_Biosynthesis.mapp
Mm_Synthesis_and_Degradation_of_Ketone_Bodies_KEGG.mapp
molecular_function-GenMAPP
Mm_GPCRDB_Class_A_Rhodopsin-like.mappMm_GPCRDB_Class_B_Secretin-like.mapp
Mm_GPCRDB_Class_C_Metabotropic_glutamate_pheromone.mapp
Mm_GPCRDB_Other.mapp
Mm_Matrix_Metalloproteinases.mapp
Mm_Monoamine_GPCRs.mapp
Mm_Nuclear_Receptors.mapp
Mm_Nucleotide_GPCRs.mapp
Mm_Peptide_GPCRs.mapp
Mm_Ribosomal_Proteins.mapp
Mm_Small_ligand_GPCRs.mapp
physiological_process-GenMAPP
Mm_ACE-Inhibitor_pathway_PharmGKB.mappMm_Blood_Clotting_Cascade.mapp
Mm_Calcium_regulation_in_cardiac_cells.mapp
Mm_Circadian_Exercise.mapp
Mm_Complement_Activation_Classical.mapp
Mm_Complement_and_Coagulation_Cascades_KEGG.mapp
Mm_Inflammatory_Response_Pathway.mapp
Mm_Irinotecan_pathway_PharmGKB.mapp
Mm_Proteasome_Degradation.mapp
Mm_Smooth_muscle_contraction.mapp
Mm_Striated_muscle_contraction.mapp